Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ITGA9-AS1 (ITGA9 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) ITGA9-AS1
LocusID (NCBI) 101928153
Atlas_Id 64685
Location 3p22.2  [Link to chromosome band 3p22]
Location_base_pair Starts at 37753689 and ends at 37861780 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ITGA9-AS1   49668
Cards
Entrez_Gene (NCBI)ITGA9-AS1  101928153  ITGA9 antisense RNA 1
Aliases
GeneCards (Weizmann)ITGA9-AS1
Ensembl hg19 (Hinxton)ENSG00000235257 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235257 [Gene_View]  chr3:37753689-37861780 [Contig_View]  ITGA9-AS1 [Vega]
ICGC DataPortalENSG00000235257
TCGA cBioPortalITGA9-AS1
AceView (NCBI)ITGA9-AS1
Genatlas (Paris)ITGA9-AS1
WikiGenes101928153
SOURCE (Princeton)ITGA9-AS1
Genetics Home Reference (NIH)ITGA9-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ITGA9-AS1  -     chr3:37753689-37861780 -  3p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITGA9-AS1  -     3p22.2   [Description]    (hg19-Feb_2009)
EnsemblITGA9-AS1 - 3p22.2 [CytoView hg19]  ITGA9-AS1 - 3p22.2 [CytoView hg38]
Mapping of homologs : NCBIITGA9-AS1 [Mapview hg19]  ITGA9-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040563 DA058144 DA501566 HY121631
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITGA9-AS1
Cluster EST : UnigeneHs.657314 [ NCBI ]
CGAP (NCI)Hs.657314
Alternative Splicing GalleryENSG00000235257
Gene ExpressionITGA9-AS1 [ NCBI-GEO ]   ITGA9-AS1 [ EBI - ARRAY_EXPRESS ]   ITGA9-AS1 [ SEEK ]   ITGA9-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ITGA9-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101928153
GTEX Portal (Tissue expression)ITGA9-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ITGA9-AS1
DMDM Disease mutations101928153
Blocks (Seattle)ITGA9-AS1
Human Protein AtlasENSG00000235257
Protein Interaction databases
FunCoupENSG00000235257
BioGRIDITGA9-AS1
STRING (EMBL)ITGA9-AS1
ZODIACITGA9-AS1
Ontologies - Pathways
Huge Navigator ITGA9-AS1 [HugePedia]
snp3D : Map Gene to Disease101928153
BioCentury BCIQITGA9-AS1
ClinGenITGA9-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101928153
Clinical trialITGA9-AS1
Miscellaneous
canSAR (ICR)ITGA9-AS1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineITGA9-AS1
EVEXITGA9-AS1
GoPubMedITGA9-AS1
iHOPITGA9-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:53:45 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.