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ITGB1-DT (ITGB1 divergent transcript)

Identity

Other alias-
HGNC (Hugo) ITGB1-DT
LocusID (NCBI) 101929475
Atlas_Id 80029
Location 10p11.22  [Link to chromosome band 10p11]
Location_base_pair Starts at 32982551 and ends at 33082101 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ITGB1-DT   53718
Cards
Entrez_Gene (NCBI)ITGB1-DT  101929475  ITGB1 divergent transcript
Aliases
GeneCards (Weizmann)ITGB1-DT
Ensembl hg19 (Hinxton)ENSG00000229656 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229656 [Gene_View]  chr10:32982551-33082101 [Contig_View]  ITGB1-DT [Vega]
ICGC DataPortalENSG00000229656
TCGA cBioPortalITGB1-DT
AceView (NCBI)ITGB1-DT
Genatlas (Paris)ITGB1-DT
WikiGenes101929475
SOURCE (Princeton)ITGB1-DT
Genetics Home Reference (NIH)ITGB1-DT
Genomic and cartography
GoldenPath hg38 (UCSC)ITGB1-DT  -     chr10:32982551-33082101 +  10p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITGB1-DT  -     10p11.22   [Description]    (hg19-Feb_2009)
EnsemblITGB1-DT - 10p11.22 [CytoView hg19]  ITGB1-DT - 10p11.22 [CytoView hg38]
Mapping of homologs : NCBIITGB1-DT [Mapview hg19]  ITGB1-DT [Mapview hg38]
Gene and transcription
Genbank (Entrez)KX352723
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITGB1-DT
Alternative Splicing GalleryENSG00000229656
Gene ExpressionITGB1-DT [ NCBI-GEO ]   ITGB1-DT [ EBI - ARRAY_EXPRESS ]   ITGB1-DT [ SEEK ]   ITGB1-DT [ MEM ]
Gene Expression Viewer (FireBrowse)ITGB1-DT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929475
GTEX Portal (Tissue expression)ITGB1-DT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ITGB1-DT
DMDM Disease mutations101929475
Blocks (Seattle)ITGB1-DT
Human Protein AtlasENSG00000229656
Protein Interaction databases
FunCoupENSG00000229656
BioGRIDITGB1-DT
STRING (EMBL)ITGB1-DT
ZODIACITGB1-DT
Ontologies - Pathways
Huge Navigator ITGB1-DT [HugePedia]
snp3D : Map Gene to Disease101929475
BioCentury BCIQITGB1-DT
ClinGenITGB1-DT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929475
Clinical trialITGB1-DT
Miscellaneous
canSAR (ICR)ITGB1-DT (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineITGB1-DT
EVEXITGB1-DT
GoPubMedITGB1-DT
iHOPITGB1-DT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:23 CEST 2017

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