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ITGB2-AS1 (ITGB2 antisense RNA 1)

Identity

Alias_namesITGB2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ITGB2-AS1
LocusID (NCBI) 100505746
Atlas_Id 64687
Location 21q22.3  [Link to chromosome band 21q22]
Location_base_pair Starts at 44921035 and ends at 44929680 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ITGB2-AS1   44304
Cards
Entrez_Gene (NCBI)ITGB2-AS1  100505746  ITGB2 antisense RNA 1
Aliases
GeneCards (Weizmann)ITGB2-AS1
Ensembl hg19 (Hinxton)ENSG00000227039 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227039 [Gene_View]  chr21:44921035-44929680 [Contig_View]  ITGB2-AS1 [Vega]
ICGC DataPortalENSG00000227039
TCGA cBioPortalITGB2-AS1
AceView (NCBI)ITGB2-AS1
Genatlas (Paris)ITGB2-AS1
WikiGenes100505746
SOURCE (Princeton)ITGB2-AS1
Genetics Home Reference (NIH)ITGB2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ITGB2-AS1  -     chr21:44921035-44929680 +  21q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITGB2-AS1  -     21q22.3   [Description]    (hg19-Feb_2009)
EnsemblITGB2-AS1 - 21q22.3 [CytoView hg19]  ITGB2-AS1 - 21q22.3 [CytoView hg38]
Mapping of homologs : NCBIITGB2-AS1 [Mapview hg19]  ITGB2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC023625 BC040064 BC051807 BC062315 BU146543
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITGB2-AS1
Cluster EST : UnigeneHs.661035 [ NCBI ]
CGAP (NCI)Hs.661035
Alternative Splicing GalleryENSG00000227039
Gene ExpressionITGB2-AS1 [ NCBI-GEO ]   ITGB2-AS1 [ EBI - ARRAY_EXPRESS ]   ITGB2-AS1 [ SEEK ]   ITGB2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ITGB2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505746
GTEX Portal (Tissue expression)ITGB2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ITGB2-AS1
DMDM Disease mutations100505746
Blocks (Seattle)ITGB2-AS1
Human Protein AtlasENSG00000227039
Protein Interaction databases
FunCoupENSG00000227039
BioGRIDITGB2-AS1
STRING (EMBL)ITGB2-AS1
ZODIACITGB2-AS1
Ontologies - Pathways
Huge Navigator ITGB2-AS1 [HugePedia]
snp3D : Map Gene to Disease100505746
BioCentury BCIQITGB2-AS1
ClinGenITGB2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505746
Clinical trialITGB2-AS1
Miscellaneous
canSAR (ICR)ITGB2-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineITGB2-AS1
EVEXITGB2-AS1
GoPubMedITGB2-AS1
iHOPITGB2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:23 CEST 2017

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