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ITIH6 (inter-alpha-trypsin inhibitor heavy chain family member 6)

Identity

Alias_namesITIH5L
inter-alpha (globulin) inhibitor H5-like
inter-alpha-trypsin inhibitor heavy chain family, member 6
Alias_symbol (synonym)UNQ6369
Other aliasdJ14O9.1
HGNC (Hugo) ITIH6
LocusID (NCBI) 347365
Atlas_Id 64690
Location Xp11.22  [Link to chromosome band Xp11]
Location_base_pair Starts at 54748899 and ends at 54798240 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ITIH6   28907
Cards
Entrez_Gene (NCBI)ITIH6  347365  inter-alpha-trypsin inhibitor heavy chain family member 6
AliasesITIH5L; UNQ6369; dJ14O9.1
GeneCards (Weizmann)ITIH6
Ensembl hg19 (Hinxton)ENSG00000102313 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000102313 [Gene_View]  chrX:54748899-54798240 [Contig_View]  ITIH6 [Vega]
ICGC DataPortalENSG00000102313
TCGA cBioPortalITIH6
AceView (NCBI)ITIH6
Genatlas (Paris)ITIH6
WikiGenes347365
SOURCE (Princeton)ITIH6
Genetics Home Reference (NIH)ITIH6
Genomic and cartography
GoldenPath hg38 (UCSC)ITIH6  -     chrX:54748899-54798240 -  Xp11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITIH6  -     Xp11.22   [Description]    (hg19-Feb_2009)
EnsemblITIH6 - Xp11.22 [CytoView hg19]  ITIH6 - Xp11.22 [CytoView hg38]
Mapping of homologs : NCBIITIH6 [Mapview hg19]  ITIH6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY358170 BC156205 BC157042 CA413764
RefSeq transcript (Entrez)NM_198510
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITIH6
Cluster EST : UnigeneHs.454272 [ NCBI ]
CGAP (NCI)Hs.454272
Alternative Splicing GalleryENSG00000102313
Gene ExpressionITIH6 [ NCBI-GEO ]   ITIH6 [ EBI - ARRAY_EXPRESS ]   ITIH6 [ SEEK ]   ITIH6 [ MEM ]
Gene Expression Viewer (FireBrowse)ITIH6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)347365
GTEX Portal (Tissue expression)ITIH6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UXX5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UXX5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UXX5
Splice isoforms : SwissVarQ6UXX5
PhosPhoSitePlusQ6UXX5
Domaine pattern : Prosite (Expaxy)VIT (PS51468)    VWFA (PS50234)   
Domains : Interpro (EBI)ITI_HC_C    VIT    VWF_A   
Domain families : Pfam (Sanger)ITI_HC_C (PF06668)    VIT (PF08487)    VWA (PF00092)   
Domain families : Pfam (NCBI)pfam06668    pfam08487    pfam00092   
Domain families : Smart (EMBL)VIT (SM00609)  VWA (SM00327)  
Conserved Domain (NCBI)ITIH6
DMDM Disease mutations347365
Blocks (Seattle)ITIH6
SuperfamilyQ6UXX5
Human Protein AtlasENSG00000102313
Peptide AtlasQ6UXX5
HPRD17164
IPIIPI00413385   
Protein Interaction databases
DIP (DOE-UCLA)Q6UXX5
IntAct (EBI)Q6UXX5
FunCoupENSG00000102313
BioGRIDITIH6
STRING (EMBL)ITIH6
ZODIACITIH6
Ontologies - Pathways
QuickGOQ6UXX5
Ontology : AmiGOserine-type endopeptidase inhibitor activity  extracellular region  negative regulation of endopeptidase activity  hyaluronan metabolic process  
Ontology : EGO-EBIserine-type endopeptidase inhibitor activity  extracellular region  negative regulation of endopeptidase activity  hyaluronan metabolic process  
NDEx NetworkITIH6
Atlas of Cancer Signalling NetworkITIH6
Wikipedia pathwaysITIH6
Orthology - Evolution
OrthoDB347365
GeneTree (enSembl)ENSG00000102313
Phylogenetic Trees/Animal Genes : TreeFamITIH6
HOVERGENQ6UXX5
HOGENOMQ6UXX5
Homologs : HomoloGeneITIH6
Homology/Alignments : Family Browser (UCSC)ITIH6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerITIH6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ITIH6
dbVarITIH6
ClinVarITIH6
1000_GenomesITIH6 
Exome Variant ServerITIH6
ExAC (Exome Aggregation Consortium)ITIH6 (select the gene name)
Genetic variants : HAPMAP347365
Genomic Variants (DGV)ITIH6 [DGVbeta]
DECIPHERITIH6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisITIH6 
Mutations
ICGC Data PortalITIH6 
TCGA Data PortalITIH6 
Broad Tumor PortalITIH6
OASIS PortalITIH6 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDITIH6
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ITIH6
DgiDB (Drug Gene Interaction Database)ITIH6
DoCM (Curated mutations)ITIH6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ITIH6 (select a term)
intoGenITIH6
Cancer3DITIH6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenITIH6
Genetic Testing Registry ITIH6
NextProtQ6UXX5 [Medical]
TSGene347365
GENETestsITIH6
Target ValidationITIH6
Huge Navigator ITIH6 [HugePedia]
snp3D : Map Gene to Disease347365
BioCentury BCIQITIH6
ClinGenITIH6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD347365
Chemical/Pharm GKB GenePA134930661
Clinical trialITIH6
Miscellaneous
canSAR (ICR)ITIH6 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineITIH6
EVEXITIH6
GoPubMedITIH6
iHOPITIH6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:46 CEST 2017

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