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ITPRIP (inositol 1,4,5-trisphosphate receptor interacting protein)

Identity

Other aliasDANGER
KIAA1754
bA127L20
bA127L20.2
HGNC (Hugo) ITPRIP
LocusID (NCBI) 85450
Atlas_Id 56698
Location 10q25.1  [Link to chromosome band 10q25]
Location_base_pair Starts at 104309696 and ends at 104328992 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ITPRIP (10q25.1) / FAM171B (2q32.1)ITPRIP (10q25.1) / KRT4 (12q13.13)TUBB4B (9q34.3) / ITPRIP (10q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ITPRIP   29370
Cards
Entrez_Gene (NCBI)ITPRIP  85450  inositol 1,4,5-trisphosphate receptor interacting protein
AliasesDANGER; KIAA1754; bA127L20; bA127L20.2
GeneCards (Weizmann)ITPRIP
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:104309696-104328992 [Contig_View]  ITPRIP [Vega]
TCGA cBioPortalITPRIP
AceView (NCBI)ITPRIP
Genatlas (Paris)ITPRIP
WikiGenes85450
SOURCE (Princeton)ITPRIP
Genetics Home Reference (NIH)ITPRIP
Genomic and cartography
GoldenPath hg38 (UCSC)ITPRIP  -     chr10:104309696-104328992 -  10q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITPRIP  -     10q25.1   [Description]    (hg19-Feb_2009)
EnsemblITPRIP - 10q25.1 [CytoView hg19]  ITPRIP - 10q25.1 [CytoView hg38]
Mapping of homologs : NCBIITPRIP [Mapview hg19]  ITPRIP [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA085530 AB051541 AK055608 AK056526 AK094802
RefSeq transcript (Entrez)NM_001272012 NM_001272013 NM_033397
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITPRIP
Cluster EST : UnigeneHs.745171 [ NCBI ]
CGAP (NCI)Hs.745171
Gene ExpressionITPRIP [ NCBI-GEO ]   ITPRIP [ EBI - ARRAY_EXPRESS ]   ITPRIP [ SEEK ]   ITPRIP [ MEM ]
Gene Expression Viewer (FireBrowse)ITPRIP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85450
GTEX Portal (Tissue expression)ITPRIP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IWB1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IWB1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IWB1
Splice isoforms : SwissVarQ8IWB1
PhosPhoSitePlusQ8IWB1
Domains : Interpro (EBI)IP3R-int    ITPRIP_fam    Mab-21_dom   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Domain families : Smart (EMBL)Mab-21 (SM01265)  
Conserved Domain (NCBI)ITPRIP
DMDM Disease mutations85450
Blocks (Seattle)ITPRIP
SuperfamilyQ8IWB1
Peptide AtlasQ8IWB1
IPIIPI00395558   IPI00427481   IPI00644872   
Protein Interaction databases
DIP (DOE-UCLA)Q8IWB1
IntAct (EBI)Q8IWB1
BioGRIDITPRIP
STRING (EMBL)ITPRIP
ZODIACITPRIP
Ontologies - Pathways
QuickGOQ8IWB1
Ontology : AmiGOplasma membrane  membrane  
Ontology : EGO-EBIplasma membrane  membrane  
NDEx NetworkITPRIP
Atlas of Cancer Signalling NetworkITPRIP
Wikipedia pathwaysITPRIP
Orthology - Evolution
OrthoDB85450
Phylogenetic Trees/Animal Genes : TreeFamITPRIP
HOVERGENQ8IWB1
HOGENOMQ8IWB1
Homologs : HomoloGeneITPRIP
Homology/Alignments : Family Browser (UCSC)ITPRIP
Gene fusions - Rearrangements
Tumor Fusion PortalITPRIP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerITPRIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ITPRIP
dbVarITPRIP
ClinVarITPRIP
1000_GenomesITPRIP 
Exome Variant ServerITPRIP
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP85450
Genomic Variants (DGV)ITPRIP [DGVbeta]
DECIPHERITPRIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisITPRIP 
Mutations
ICGC Data PortalITPRIP 
TCGA Data PortalITPRIP 
Broad Tumor PortalITPRIP
OASIS PortalITPRIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICITPRIP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDITPRIP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ITPRIP
DgiDB (Drug Gene Interaction Database)ITPRIP
DoCM (Curated mutations)ITPRIP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ITPRIP (select a term)
intoGenITPRIP
Cancer3DITPRIP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETITPRIP
MedgenITPRIP
Genetic Testing Registry ITPRIP
NextProtQ8IWB1 [Medical]
TSGene85450
GENETestsITPRIP
Target ValidationITPRIP
Huge Navigator ITPRIP [HugePedia]
snp3D : Map Gene to Disease85450
BioCentury BCIQITPRIP
ClinGenITPRIP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85450
Chemical/Pharm GKB GenePA162392344
Clinical trialITPRIP
Miscellaneous
canSAR (ICR)ITPRIP (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineITPRIP
EVEXITPRIP
GoPubMedITPRIP
iHOPITPRIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:18:19 CET 2017

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