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ITPRIPL2 (inositol 1,4,5-trisphosphate receptor interacting protein like 2)

Identity

Alias_symbol (synonym)FLJ22994
MGC126798
MGC126800
LOC162073
Other alias-
HGNC (Hugo) ITPRIPL2
LocusID (NCBI) 162073
Atlas_Id 64700
Location 16p12.3  [Link to chromosome band 16p12]
Location_base_pair Starts at 19113932 and ends at 19121630 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ITPRIPL2 (16p12.3) / DSG2 (18q12.1)ITPRIPL2 (16p12.3) / GGCX (2p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ITPRIPL2   27257
Cards
Entrez_Gene (NCBI)ITPRIPL2  162073  inositol 1,4,5-trisphosphate receptor interacting protein like 2
Aliases
GeneCards (Weizmann)ITPRIPL2
Ensembl hg19 (Hinxton)ENSG00000205730 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205730 [Gene_View]  chr16:19113932-19121630 [Contig_View]  ITPRIPL2 [Vega]
ICGC DataPortalENSG00000205730
TCGA cBioPortalITPRIPL2
AceView (NCBI)ITPRIPL2
Genatlas (Paris)ITPRIPL2
WikiGenes162073
SOURCE (Princeton)ITPRIPL2
Genetics Home Reference (NIH)ITPRIPL2
Genomic and cartography
GoldenPath hg38 (UCSC)ITPRIPL2  -     chr16:19113932-19121630 +  16p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ITPRIPL2  -     16p12.3   [Description]    (hg19-Feb_2009)
EnsemblITPRIPL2 - 16p12.3 [CytoView hg19]  ITPRIPL2 - 16p12.3 [CytoView hg38]
Mapping of homologs : NCBIITPRIPL2 [Mapview hg19]  ITPRIPL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026647 AK096327 AK097274 BC015343 BC101749
RefSeq transcript (Entrez)NM_001034841
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ITPRIPL2
Cluster EST : UnigeneHs.530899 [ NCBI ]
CGAP (NCI)Hs.530899
Alternative Splicing GalleryENSG00000205730
Gene ExpressionITPRIPL2 [ NCBI-GEO ]   ITPRIPL2 [ EBI - ARRAY_EXPRESS ]   ITPRIPL2 [ SEEK ]   ITPRIPL2 [ MEM ]
Gene Expression Viewer (FireBrowse)ITPRIPL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)162073
GTEX Portal (Tissue expression)ITPRIPL2
Human Protein AtlasENSG00000205730-ITPRIPL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3MIP1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3MIP1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3MIP1
Splice isoforms : SwissVarQ3MIP1
PhosPhoSitePlusQ3MIP1
Domains : Interpro (EBI)IP3R-int-like_2    ITPRIP_fam    Mab-21_dom   
Domain families : Pfam (Sanger)Mab-21 (PF03281)   
Domain families : Pfam (NCBI)pfam03281   
Domain families : Smart (EMBL)Mab-21 (SM01265)  
Conserved Domain (NCBI)ITPRIPL2
DMDM Disease mutations162073
Blocks (Seattle)ITPRIPL2
SuperfamilyQ3MIP1
Human Protein Atlas [tissue]ENSG00000205730-ITPRIPL2 [tissue]
Peptide AtlasQ3MIP1
HPRD18743
IPIIPI00183879   
Protein Interaction databases
DIP (DOE-UCLA)Q3MIP1
IntAct (EBI)Q3MIP1
FunCoupENSG00000205730
BioGRIDITPRIPL2
STRING (EMBL)ITPRIPL2
ZODIACITPRIPL2
Ontologies - Pathways
QuickGOQ3MIP1
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkITPRIPL2
Atlas of Cancer Signalling NetworkITPRIPL2
Wikipedia pathwaysITPRIPL2
Orthology - Evolution
OrthoDB162073
GeneTree (enSembl)ENSG00000205730
Phylogenetic Trees/Animal Genes : TreeFamITPRIPL2
HOVERGENQ3MIP1
HOGENOMQ3MIP1
Homologs : HomoloGeneITPRIPL2
Homology/Alignments : Family Browser (UCSC)ITPRIPL2
Gene fusions - Rearrangements
Fusion: Tumor Portal ITPRIPL2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerITPRIPL2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ITPRIPL2
dbVarITPRIPL2
ClinVarITPRIPL2
1000_GenomesITPRIPL2 
Exome Variant ServerITPRIPL2
ExAC (Exome Aggregation Consortium)ENSG00000205730
GNOMAD BrowserENSG00000205730
Genetic variants : HAPMAP162073
Genomic Variants (DGV)ITPRIPL2 [DGVbeta]
DECIPHERITPRIPL2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisITPRIPL2 
Mutations
ICGC Data PortalITPRIPL2 
TCGA Data PortalITPRIPL2 
Broad Tumor PortalITPRIPL2
OASIS PortalITPRIPL2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICITPRIPL2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDITPRIPL2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ITPRIPL2
DgiDB (Drug Gene Interaction Database)ITPRIPL2
DoCM (Curated mutations)ITPRIPL2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ITPRIPL2 (select a term)
intoGenITPRIPL2
Cancer3DITPRIPL2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenITPRIPL2
Genetic Testing Registry ITPRIPL2
NextProtQ3MIP1 [Medical]
TSGene162073
GENETestsITPRIPL2
Target ValidationITPRIPL2
Huge Navigator ITPRIPL2 [HugePedia]
snp3D : Map Gene to Disease162073
BioCentury BCIQITPRIPL2
ClinGenITPRIPL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD162073
Chemical/Pharm GKB GenePA164721117
Clinical trialITPRIPL2
Miscellaneous
canSAR (ICR)ITPRIPL2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineITPRIPL2
EVEXITPRIPL2
GoPubMedITPRIPL2
iHOPITPRIPL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 11:51:51 CET 2017

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