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IZUMO4 (IZUMO family member 4)

Identity

Alias_namesC19orf36
chromosome 19 open reading frame 36
Other aliasIMAGE:4215339
HGNC (Hugo) IZUMO4
LocusID (NCBI) 113177
Atlas_Id 64708
Location 19p13.3  [Link to chromosome band 19p13]
Location_base_pair Starts at 2096868 and ends at 2099583 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)IZUMO4   26950
Cards
Entrez_Gene (NCBI)IZUMO4  113177  IZUMO family member 4
AliasesC19orf36; IMAGE:4215339
GeneCards (Weizmann)IZUMO4
Ensembl hg19 (Hinxton)ENSG00000099840 [Gene_View]  chr19:2096868-2099583 [Contig_View]  IZUMO4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000099840 [Gene_View]  chr19:2096868-2099583 [Contig_View]  IZUMO4 [Vega]
ICGC DataPortalENSG00000099840
TCGA cBioPortalIZUMO4
AceView (NCBI)IZUMO4
Genatlas (Paris)IZUMO4
WikiGenes113177
SOURCE (Princeton)IZUMO4
Genetics Home Reference (NIH)IZUMO4
Genomic and cartography
GoldenPath hg19 (UCSC)IZUMO4  -     chr19:2096868-2099583 +  19p13.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)IZUMO4  -     19p13.3   [Description]    (hg38-Dec_2013)
EnsemblIZUMO4 - 19p13.3 [CytoView hg19]  IZUMO4 - 19p13.3 [CytoView hg38]
Mapping of homologs : NCBIIZUMO4 [Mapview hg19]  IZUMO4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK294083 AK301957 AW182303 AY358444 AY753639
RefSeq transcript (Entrez)NM_001031735 NM_001039846 NM_052878
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929412
Consensus coding sequences : CCDS (NCBI)IZUMO4
Cluster EST : UnigeneHs.424049 [ NCBI ]
CGAP (NCI)Hs.424049
Alternative Splicing GalleryENSG00000099840
Gene ExpressionIZUMO4 [ NCBI-GEO ]   IZUMO4 [ EBI - ARRAY_EXPRESS ]   IZUMO4 [ SEEK ]   IZUMO4 [ MEM ]
Gene Expression Viewer (FireBrowse)IZUMO4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)113177
GTEX Portal (Tissue expression)IZUMO4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ1ZYL8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ1ZYL8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ1ZYL8
Splice isoforms : SwissVarQ1ZYL8
PhosPhoSitePlusQ1ZYL8
Domains : Interpro (EBI)IZUMO   
Domain families : Pfam (Sanger)IZUMO (PF15005)   
Domain families : Pfam (NCBI)pfam15005   
Conserved Domain (NCBI)IZUMO4
DMDM Disease mutations113177
Blocks (Seattle)IZUMO4
SuperfamilyQ1ZYL8
Human Protein AtlasENSG00000099840
Peptide AtlasQ1ZYL8
HPRD12708
IPIIPI00411390   IPI00789718   IPI00737582   
Protein Interaction databases
DIP (DOE-UCLA)Q1ZYL8
IntAct (EBI)Q1ZYL8
FunCoupENSG00000099840
BioGRIDIZUMO4
STRING (EMBL)IZUMO4
ZODIACIZUMO4
Ontologies - Pathways
QuickGOQ1ZYL8
Ontology : AmiGOextracellular region  nucleus  
Ontology : EGO-EBIextracellular region  nucleus  
NDEx NetworkIZUMO4
Atlas of Cancer Signalling NetworkIZUMO4
Wikipedia pathwaysIZUMO4
Orthology - Evolution
OrthoDB113177
GeneTree (enSembl)ENSG00000099840
Phylogenetic Trees/Animal Genes : TreeFamIZUMO4
HOVERGENQ1ZYL8
HOGENOMQ1ZYL8
Homologs : HomoloGeneIZUMO4
Homology/Alignments : Family Browser (UCSC)IZUMO4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerIZUMO4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)IZUMO4
dbVarIZUMO4
ClinVarIZUMO4
1000_GenomesIZUMO4 
Exome Variant ServerIZUMO4
ExAC (Exome Aggregation Consortium)IZUMO4 (select the gene name)
Genetic variants : HAPMAP113177
Genomic Variants (DGV)IZUMO4 [DGVbeta]
DECIPHER (Syndromes)19:2096868-2099583  ENSG00000099840
CONAN: Copy Number AnalysisIZUMO4 
Mutations
ICGC Data PortalIZUMO4 
TCGA Data PortalIZUMO4 
Broad Tumor PortalIZUMO4
OASIS PortalIZUMO4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICIZUMO4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDIZUMO4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch IZUMO4
DgiDB (Drug Gene Interaction Database)IZUMO4
DoCM (Curated mutations)IZUMO4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)IZUMO4 (select a term)
intoGenIZUMO4
Cancer3DIZUMO4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenIZUMO4
Genetic Testing Registry IZUMO4
NextProtQ1ZYL8 [Medical]
TSGene113177
GENETestsIZUMO4
Huge Navigator IZUMO4 [HugePedia]
snp3D : Map Gene to Disease113177
BioCentury BCIQIZUMO4
ClinGenIZUMO4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD113177
Chemical/Pharm GKB GenePA165393578
Clinical trialIZUMO4
Miscellaneous
canSAR (ICR)IZUMO4 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineIZUMO4
EVEXIZUMO4
GoPubMedIZUMO4
iHOPIZUMO4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:09 CET 2017

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