Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

JADRR (JADE1 adjacent regulatory RNA)

Identity

Alias_namesLINC00915
long intergenic non-protein coding RNA 915
Alias_symbol (synonym)lncRNA-JADE
Other alias
HGNC (Hugo) JADRR
LocusID (NCBI) 101669763
Atlas_Id 64710
Location 4q28.2  [Link to chromosome band 4q28]
Location_base_pair Starts at 128768228 and ends at 128769932 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)JADRR   48601
Cards
Entrez_Gene (NCBI)JADRR  101669763  JADE1 adjacent regulatory RNA
AliasesLINC00915; lncRNA-JADE
GeneCards (Weizmann)JADRR
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:128768228-128769932 [Contig_View]  JADRR [Vega]
TCGA cBioPortalJADRR
AceView (NCBI)JADRR
Genatlas (Paris)JADRR
WikiGenes101669763
SOURCE (Princeton)JADRR
Genetics Home Reference (NIH)JADRR
Genomic and cartography
GoldenPath hg38 (UCSC)JADRR  -     chr4:128768228-128769932 +  4q28.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)JADRR  -     4q28.2   [Description]    (hg19-Feb_2009)
EnsemblJADRR - 4q28.2 [CytoView hg19]  JADRR - 4q28.2 [CytoView hg38]
Mapping of homologs : NCBIJADRR [Mapview hg19]  JADRR [Mapview hg38]
Gene and transcription
Genbank (Entrez)KC469579
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)JADRR
Gene ExpressionJADRR [ NCBI-GEO ]   JADRR [ EBI - ARRAY_EXPRESS ]   JADRR [ SEEK ]   JADRR [ MEM ]
Gene Expression Viewer (FireBrowse)JADRR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101669763
GTEX Portal (Tissue expression)JADRR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)JADRR
DMDM Disease mutations101669763
Blocks (Seattle)JADRR
Protein Interaction databases
BioGRIDJADRR
STRING (EMBL)JADRR
ZODIACJADRR
Ontologies - Pathways
Huge Navigator JADRR [HugePedia]
snp3D : Map Gene to Disease101669763
BioCentury BCIQJADRR
ClinGenJADRR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101669763
Clinical trialJADRR
Miscellaneous
canSAR (ICR)JADRR (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineJADRR
EVEXJADRR
GoPubMedJADRR
iHOPJADRR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:53:50 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.