Atlas of Genetics and Cytogenetics in Oncology and Haematology


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JARID2-AS1 (JARID2 antisense RNA 1)

Identity

Alias_namesJARID2 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) JARID2-AS1
LocusID (NCBI) 100506681
Atlas_Id 64715
Location 6p22.3  [Link to chromosome band 6p22]
Location_base_pair Starts at 15248046 and ends at 15248927 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)JARID2-AS1   40314
Cards
Entrez_Gene (NCBI)JARID2-AS1  100506681  JARID2 antisense RNA 1
Aliases
GeneCards (Weizmann)JARID2-AS1
Ensembl hg19 (Hinxton)ENSG00000235488 [Gene_View]  chr6:15248046-15248927 [Contig_View]  JARID2-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235488 [Gene_View]  chr6:15248046-15248927 [Contig_View]  JARID2-AS1 [Vega]
ICGC DataPortalENSG00000235488
TCGA cBioPortalJARID2-AS1
AceView (NCBI)JARID2-AS1
Genatlas (Paris)JARID2-AS1
WikiGenes100506681
SOURCE (Princeton)JARID2-AS1
Genetics Home Reference (NIH)JARID2-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)JARID2-AS1  -     chr6:15248046-15248927 -  6p22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)JARID2-AS1  -     6p22.3   [Description]    (hg38-Dec_2013)
EnsemblJARID2-AS1 - 6p22.3 [CytoView hg19]  JARID2-AS1 - 6p22.3 [CytoView hg38]
Mapping of homologs : NCBIJARID2-AS1 [Mapview hg19]  JARID2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI218808 BC033996 HG499014 HY051522
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_007592 NW_004929326
Consensus coding sequences : CCDS (NCBI)JARID2-AS1
Cluster EST : UnigeneHs.664092 [ NCBI ]
CGAP (NCI)Hs.664092
Alternative Splicing GalleryENSG00000235488
Gene ExpressionJARID2-AS1 [ NCBI-GEO ]   JARID2-AS1 [ EBI - ARRAY_EXPRESS ]   JARID2-AS1 [ SEEK ]   JARID2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)JARID2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506681
GTEX Portal (Tissue expression)JARID2-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)JARID2-AS1
DMDM Disease mutations100506681
Blocks (Seattle)JARID2-AS1
Human Protein AtlasENSG00000235488
Protein Interaction databases
FunCoupENSG00000235488
BioGRIDJARID2-AS1
STRING (EMBL)JARID2-AS1
ZODIACJARID2-AS1
Ontologies - Pathways
Huge Navigator JARID2-AS1 [HugePedia]
snp3D : Map Gene to Disease100506681
BioCentury BCIQJARID2-AS1
ClinGenJARID2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506681
Clinical trialJARID2-AS1
Miscellaneous
canSAR (ICR)JARID2-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineJARID2-AS1
EVEXJARID2-AS1
GoPubMedJARID2-AS1
iHOPJARID2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:11 CET 2017

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