Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

JHDM1D-AS1 (JHDM1D antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) JHDM1D-AS1
LocusID (NCBI) 100134229
Atlas_Id 64717
Location 7q34  [Link to chromosome band 7q34]
Location_base_pair Starts at 140177261 and ends at 140179640 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)JHDM1D-AS1   48959
Cards
Entrez_Gene (NCBI)JHDM1D-AS1  100134229  JHDM1D antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)JHDM1D-AS1
Ensembl hg19 (Hinxton)ENSG00000260231 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260231 [Gene_View]  chr7:140177261-140179640 [Contig_View]  JHDM1D-AS1 [Vega]
ICGC DataPortalENSG00000260231
TCGA cBioPortalJHDM1D-AS1
AceView (NCBI)JHDM1D-AS1
Genatlas (Paris)JHDM1D-AS1
WikiGenes100134229
SOURCE (Princeton)JHDM1D-AS1
Genetics Home Reference (NIH)JHDM1D-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)JHDM1D-AS1  -     chr7:140177261-140179640 +  7q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)JHDM1D-AS1  -     7q34   [Description]    (hg19-Feb_2009)
EnsemblJHDM1D-AS1 - 7q34 [CytoView hg19]  JHDM1D-AS1 - 7q34 [CytoView hg38]
Mapping of homologs : NCBIJHDM1D-AS1 [Mapview hg19]  JHDM1D-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA493421 AK026372 DA585317 DA816865
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)JHDM1D-AS1
Cluster EST : UnigeneHs.634333 [ NCBI ]
CGAP (NCI)Hs.634333
Alternative Splicing GalleryENSG00000260231
Gene ExpressionJHDM1D-AS1 [ NCBI-GEO ]   JHDM1D-AS1 [ EBI - ARRAY_EXPRESS ]   JHDM1D-AS1 [ SEEK ]   JHDM1D-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)JHDM1D-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100134229
GTEX Portal (Tissue expression)JHDM1D-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)JHDM1D-AS1
DMDM Disease mutations100134229
Blocks (Seattle)JHDM1D-AS1
Human Protein AtlasENSG00000260231
Protein Interaction databases
FunCoupENSG00000260231
BioGRIDJHDM1D-AS1
STRING (EMBL)JHDM1D-AS1
ZODIACJHDM1D-AS1
Ontologies - Pathways
Huge Navigator JHDM1D-AS1 [HugePedia]
snp3D : Map Gene to Disease100134229
BioCentury BCIQJHDM1D-AS1
ClinGenJHDM1D-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100134229
Clinical trialJHDM1D-AS1
Miscellaneous
canSAR (ICR)JHDM1D-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineJHDM1D-AS1
EVEXJHDM1D-AS1
GoPubMedJHDM1D-AS1
iHOPJHDM1D-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:53:51 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.