| Nomenclature | | HGNC (Hugo) | JMJD1C 12313 |
| Entrez_Gene (NCBI) | JMJD1C 221037 jumonji domain containing 1C |
| Cards | | GeneCards (Weizmann) | JMJD1C |
| Ensembl (Hinxton) | ENSG00000171988 [Gene_View] chr10:64926988-65028982 [Contig_View] JMJD1C [Vega] |
| AceView (NCBI) | JMJD1C |
| Genatlas (Paris) | JMJD1C |
| SOURCE (Stanford) | NM_004241 NM_032776 |
| Genomic and cartography | | GoldenPath (UCSC) | JMJD1C - 10q21.3 chr10:64926988-65028982 - 10q21.3 [Description] (hg19-Feb_2009) |
| Ensembl | JMJD1C - 10q21.3 [CytoView] |
| Mapping of homologs : NCBI | JMJD1C [Mapview] |
| OMIM | 604503 |
| Gene and transcription |
| Genbank (Entrez) | AB037801 AK024991 AK027280 AK056660 AK095584 |
| RefSeq transcript (SRS) | NM_004241 NM_032776 |
| RefSeq transcript (Entrez) | NM_004241 NM_032776 |
| RefSeq genomic (SRS) | AC_000142 NC_000010 NC_018921 NT_030059 NW_001837986 NW_004078068 |
| RefSeq genomic (Entrez) | AC_000142 NC_000010 NC_018921 NT_030059 NW_001837986 NW_004078068 |
| Consensus coding sequences : CCDS (NCBI) | JMJD1C |
| Cluster EST : Unigene | Hs.413416 [ SRS ] Hs.413416 [ NCBI ] |
| CGAP (NCI) | Hs.413416 |
| Alternative Splicing : Fast-db (Paris) | GSHG0004111 |
| Alternative Splicing Gallery | ENSG00000171988 |
| Gene Expression | JMJD1C [ NCBI-GEO ] JMJD1C [ EBI - ARRAY_EXPRESS ] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | Q15652 (SRS) Q15652 (Uniprot) |
| NextProt | Q15652 |
| With graphics : InterPro | Q15652 |
| Splice isoforms : SwissVar | Q15652(Swissvar) |
| Domaine pattern : Prosite (SRS) | JMJC (PS51184) |
| Domaine pattern : Prosite (Expaxy) | JMJC (PS51184) |
| Domains : Interpro (SRS) | JmjC_dom |
| Domains : Interpro (EBI) | JmjC_dom |
| Related proteins : CluSTr | Q15652 |
| Domain families : Pfam (SRS) | JmjC (PF02373) |
| Domain families : Pfam (Sanger) | JmjC (PF02373) |
| Domain families : Pfam (NCBI) | pfam02373 |
| Domain families : Smart (EMBL) | JmjC (SM00558) |
| DMDM | 221037 |
| Blocks (Seattle) | Q15652 |
| Human Protein Atlas | ENSG00000171988 |
| HPRD | 05141 |
| IPI | IPI00384202 IPI00902772 IPI01012411 IPI01026089 IPI00641392 IPI00847837 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | Q15652 |
| IntAct (EBI) | Q15652 |
| FunCoup | ENSG00000171988 |
| REACTOME | JMJD1C |
| Protein Interaction Database | 221037 |
| BioGRID | JMJD1C |
| InParanoid | Q15652 |
| Interologous Interaction database | Q15652 |
| IntegromeDB | JMJD1C |
| Polymorphism : SNP, mutations, diseases | | SNP Single Nucleotide Polymorphism (NCBI) | JMJD1C |
| SNP (GeneSNP Utah) | JMJD1C |
| SNP : HGBase | JMJD1C |
| Genetic variants : HAPMAP | JMJD1C |
| Somatic Mutations in Cancer : COSMIC | JMJD1C |
| CONAN: Copy Number Analysis | JMJD1C |
| Mutations and Diseases : HGMD | JMJD1C |
| OMIM | 604503 |
| GENETests | 604503 |
| Disease Genetic Association | JMJD1C |
| Huge Navigator |
JMJD1C [HugePedia] JMJD1C [HugeCancerGEM] |
| Genomic Variants | JMJD1C JMJD1C [DGVbeta] |
| snp3D : Map Gene to Disease | 221037 |
| General knowledge |
|---|
| Homologs : HomoloGene | JMJD1C |
| Homology/Alignments : Family Browser (UCSC) | JMJD1C |
| Phylogenetic Trees/Animal Genes : TreeFam | JMJD1C |
| Catalytic activity : Enzyme | 1.14.11.- [ Enzyme-Expasy ] 1.14.11.- [ Enzyme-SRS ] 1.14.11.- [ IntEnz-EBI ] 1.14.11.- [ BRENDA ] 1.14.11.- [ KEGG ] |
| Chemical/Protein Interactions : CTD | 221037 |
| Chemical/Pharm GKB Gene | PA128394767 |
| Clinical trial | JMJD1C |
| Cancer Resource (Charite) | ENSG00000171988 |
| Ontology : AmiGO | protein binding intracellular nucleoplasm transcription, DNA-dependent regulation of transcription, DNA-dependent blood coagulation chromatin modification oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen metal ion binding thyroid hormone receptor binding |
| Ontology : EGO-EBI | protein binding intracellular nucleoplasm transcription, DNA-dependent regulation of transcription, DNA-dependent blood coagulation chromatin modification oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen metal ion binding thyroid hormone receptor binding |
| Other databases |
| Probes |
|---|
| Litterature | | PubMed | 26 Pubmed reference(s) in Entrez |
| PubGene | JMJD1C |
| iHOP | JMJD1C |
