Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

JPX (JPX transcript, XIST activator (non-protein coding))

Identity

Alias_namesNCRNA00183
non-protein coding RNA 183
Alias_symbol (synonym)ENOX
LINC00183
DCBALD06
Other alias
HGNC (Hugo) JPX
LocusID (NCBI) 554203
Atlas_Id 64727
Location Xq13.2  [Link to chromosome band Xq13]
Location_base_pair Starts at 73944324 and ends at 74070382 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
JPX (Xq13.2) / ATXN7L1 (7q22.3)JPX (Xq13.2) / GHITM (10q23.1)JPX (Xq13.2) / SERPINB1 (6p25.2)
JPX (Xq13.2) / USP12 (13q12.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)JPX   37191
Cards
Entrez_Gene (NCBI)JPX  554203  JPX transcript, XIST activator (non-protein coding)
AliasesDCBALD06; ENOX; LINC00183; NCRNA00183
GeneCards (Weizmann)JPX
Ensembl hg19 (Hinxton)ENSG00000225470 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000225470 [Gene_View]  chrX:73944324-74070382 [Contig_View]  JPX [Vega]
ICGC DataPortalENSG00000225470
TCGA cBioPortalJPX
AceView (NCBI)JPX
Genatlas (Paris)JPX
WikiGenes554203
SOURCE (Princeton)JPX
Genetics Home Reference (NIH)JPX
Genomic and cartography
GoldenPath hg38 (UCSC)JPX  -     chrX:73944324-74070382 +  Xq13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)JPX  -     Xq13.2   [Description]    (hg19-Feb_2009)
EnsemblJPX - Xq13.2 [CytoView hg19]  JPX - Xq13.2 [CytoView hg38]
Mapping of homologs : NCBIJPX [Mapview hg19]  JPX [Mapview hg38]
OMIM300832   
Gene and transcription
Genbank (Entrez)AK056172 AV714079 BC029480 BC071776 BP871721
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)JPX
Cluster EST : UnigeneHs.648316 [ NCBI ]
CGAP (NCI)Hs.648316
Alternative Splicing GalleryENSG00000225470
Gene ExpressionJPX [ NCBI-GEO ]   JPX [ EBI - ARRAY_EXPRESS ]   JPX [ SEEK ]   JPX [ MEM ]
Gene Expression Viewer (FireBrowse)JPX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)554203
GTEX Portal (Tissue expression)JPX
Human Protein AtlasENSG00000225470-JPX [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)JPX
DMDM Disease mutations554203
Blocks (Seattle)JPX
Human Protein Atlas [tissue]ENSG00000225470-JPX [tissue]
IPIIPI00749093   
Protein Interaction databases
FunCoupENSG00000225470
BioGRIDJPX
STRING (EMBL)JPX
ZODIACJPX
Ontologies - Pathways
Huge Navigator JPX [HugePedia]
snp3D : Map Gene to Disease554203
BioCentury BCIQJPX
ClinGenJPX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD554203
Chemical/Pharm GKB GenePA165757157
Clinical trialJPX
Miscellaneous
canSAR (ICR)JPX (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineJPX
EVEXJPX
GoPubMedJPX
iHOPJPX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:51:56 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.