Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KAAG1 (kidney associated antigen 1)

Identity

Alias_symbol (synonym)RU2
RU2AS
Other alias
HGNC (Hugo) KAAG1
LocusID (NCBI) 353219
Atlas_Id 64732
Location 6p22.3  [Link to chromosome band 6p22]
Location_base_pair Starts at 24356903 and ends at 24358284 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KAAG1   21031
Cards
Entrez_Gene (NCBI)KAAG1  353219  kidney associated antigen 1
AliasesRU2AS
GeneCards (Weizmann)KAAG1
Ensembl hg19 (Hinxton)ENSG00000146049 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000146049 [Gene_View]  chr6:24356903-24358284 [Contig_View]  KAAG1 [Vega]
ICGC DataPortalENSG00000146049
TCGA cBioPortalKAAG1
AceView (NCBI)KAAG1
Genatlas (Paris)KAAG1
WikiGenes353219
SOURCE (Princeton)KAAG1
Genetics Home Reference (NIH)KAAG1
Genomic and cartography
GoldenPath hg38 (UCSC)KAAG1  -     chr6:24356903-24358284 +  6p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KAAG1  -     6p22.3   [Description]    (hg19-Feb_2009)
EnsemblKAAG1 - 6p22.3 [CytoView hg19]  KAAG1 - 6p22.3 [CytoView hg38]
Mapping of homologs : NCBIKAAG1 [Mapview hg19]  KAAG1 [Mapview hg38]
OMIM608211   
Gene and transcription
Genbank (Entrez)AF181722 BC119739 BC119740 BC152886
RefSeq transcript (Entrez)NM_181337
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KAAG1
Cluster EST : UnigeneHs.697888 [ NCBI ]
CGAP (NCI)Hs.697888
Alternative Splicing GalleryENSG00000146049
Gene ExpressionKAAG1 [ NCBI-GEO ]   KAAG1 [ EBI - ARRAY_EXPRESS ]   KAAG1 [ SEEK ]   KAAG1 [ MEM ]
Gene Expression Viewer (FireBrowse)KAAG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)353219
GTEX Portal (Tissue expression)KAAG1
Human Protein AtlasENSG00000146049-KAAG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBP8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UBP8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UBP8
Splice isoforms : SwissVarQ9UBP8
PhosPhoSitePlusQ9UBP8
Domains : Interpro (EBI)KAAG1   
Domain families : Pfam (Sanger)KAAG1 (PF15354)   
Domain families : Pfam (NCBI)pfam15354   
Conserved Domain (NCBI)KAAG1
DMDM Disease mutations353219
Blocks (Seattle)KAAG1
SuperfamilyQ9UBP8
Human Protein Atlas [tissue]ENSG00000146049-KAAG1 [tissue]
Peptide AtlasQ9UBP8
HPRD09741
IPIIPI00010920   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBP8
IntAct (EBI)Q9UBP8
FunCoupENSG00000146049
BioGRIDKAAG1
STRING (EMBL)KAAG1
ZODIACKAAG1
Ontologies - Pathways
QuickGOQ9UBP8
Ontology : AmiGOcellular_component  immune response  
Ontology : EGO-EBIcellular_component  immune response  
NDEx NetworkKAAG1
Atlas of Cancer Signalling NetworkKAAG1
Wikipedia pathwaysKAAG1
Orthology - Evolution
OrthoDB353219
GeneTree (enSembl)ENSG00000146049
Phylogenetic Trees/Animal Genes : TreeFamKAAG1
HOVERGENQ9UBP8
HOGENOMQ9UBP8
Homologs : HomoloGeneKAAG1
Homology/Alignments : Family Browser (UCSC)KAAG1
Gene fusions - Rearrangements
Fusion : QuiverKAAG1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKAAG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KAAG1
dbVarKAAG1
ClinVarKAAG1
1000_GenomesKAAG1 
Exome Variant ServerKAAG1
ExAC (Exome Aggregation Consortium)ENSG00000146049
GNOMAD BrowserENSG00000146049
Genetic variants : HAPMAP353219
Genomic Variants (DGV)KAAG1 [DGVbeta]
DECIPHERKAAG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKAAG1 
Mutations
ICGC Data PortalKAAG1 
TCGA Data PortalKAAG1 
Broad Tumor PortalKAAG1
OASIS PortalKAAG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKAAG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKAAG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KAAG1
DgiDB (Drug Gene Interaction Database)KAAG1
DoCM (Curated mutations)KAAG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KAAG1 (select a term)
intoGenKAAG1
Cancer3DKAAG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608211   
Orphanet
DisGeNETKAAG1
MedgenKAAG1
Genetic Testing Registry KAAG1
NextProtQ9UBP8 [Medical]
TSGene353219
GENETestsKAAG1
Target ValidationKAAG1
Huge Navigator KAAG1 [HugePedia]
snp3D : Map Gene to Disease353219
BioCentury BCIQKAAG1
ClinGenKAAG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD353219
Chemical/Pharm GKB GenePA134915618
Clinical trialKAAG1
Miscellaneous
canSAR (ICR)KAAG1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKAAG1
EVEXKAAG1
GoPubMedKAAG1
iHOPKAAG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Feb 23 18:22:24 CET 2018

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