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KANSL1L (KAT8 regulatory NSL complex subunit 1 like)

Identity

Alias_namesC2orf67
chromosome 2 open reading frame 67
KAT8 regulatory NSL complex subunit 1-like
Alias_symbol (synonym)FLJ23861
FLJ32349
MSL1v2
KIAA1267L
Other alias
HGNC (Hugo) KANSL1L
LocusID (NCBI) 151050
Atlas_Id 64738
Location 2q34  [Link to chromosome band 2q34]
Location_base_pair Starts at 210021421 and ends at 210171370 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ACADL (2q34) / KANSL1L (2q34)BMPR2 (2q33.1) / KANSL1L (2q34)KANSL1L (2q34) / ACADL (2q34)
KANSL1L (2q34) / ERBB4 (2q34)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KANSL1L   26310
Cards
Entrez_Gene (NCBI)KANSL1L  151050  KAT8 regulatory NSL complex subunit 1 like
AliasesC2orf67; MSL1v2
GeneCards (Weizmann)KANSL1L
Ensembl hg19 (Hinxton)ENSG00000144445 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144445 [Gene_View]  chr2:210021421-210171370 [Contig_View]  KANSL1L [Vega]
ICGC DataPortalENSG00000144445
TCGA cBioPortalKANSL1L
AceView (NCBI)KANSL1L
Genatlas (Paris)KANSL1L
WikiGenes151050
SOURCE (Princeton)KANSL1L
Genetics Home Reference (NIH)KANSL1L
Genomic and cartography
GoldenPath hg38 (UCSC)KANSL1L  -     chr2:210021421-210171370 -  2q34   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KANSL1L  -     2q34   [Description]    (hg19-Feb_2009)
EnsemblKANSL1L - 2q34 [CytoView hg19]  KANSL1L - 2q34 [CytoView hg38]
Mapping of homologs : NCBIKANSL1L [Mapview hg19]  KANSL1L [Mapview hg38]
OMIM613833   
Gene and transcription
Genbank (Entrez)AA252480 AA404520 AI289109 AI679696 AK056911
RefSeq transcript (Entrez)NM_001307976 NM_152519
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KANSL1L
Cluster EST : UnigeneHs.591638 [ NCBI ]
CGAP (NCI)Hs.591638
Alternative Splicing GalleryENSG00000144445
Gene ExpressionKANSL1L [ NCBI-GEO ]   KANSL1L [ EBI - ARRAY_EXPRESS ]   KANSL1L [ SEEK ]   KANSL1L [ MEM ]
Gene Expression Viewer (FireBrowse)KANSL1L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)151050
GTEX Portal (Tissue expression)KANSL1L
Protein : pattern, domain, 3D structure
UniProt/SwissProtA0AUZ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA0AUZ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA0AUZ9
Splice isoforms : SwissVarA0AUZ9
PhosPhoSitePlusA0AUZ9
Domains : Interpro (EBI)NSL1    PEHE_dom   
Domain families : Pfam (Sanger)PEHE (PF15275)   
Domain families : Pfam (NCBI)pfam15275   
Domain families : Smart (EMBL)PEHE (SM01300)  
Conserved Domain (NCBI)KANSL1L
DMDM Disease mutations151050
Blocks (Seattle)KANSL1L
SuperfamilyA0AUZ9
Human Protein AtlasENSG00000144445
Peptide AtlasA0AUZ9
HPRD08679
IPIIPI00396341   IPI00884975   IPI00884987   IPI00885003   IPI00925375   IPI00925622   
Protein Interaction databases
DIP (DOE-UCLA)A0AUZ9
IntAct (EBI)A0AUZ9
FunCoupENSG00000144445
BioGRIDKANSL1L
STRING (EMBL)KANSL1L
ZODIACKANSL1L
Ontologies - Pathways
QuickGOA0AUZ9
Ontology : AmiGOhistone acetyltransferase complex  
Ontology : EGO-EBIhistone acetyltransferase complex  
NDEx NetworkKANSL1L
Atlas of Cancer Signalling NetworkKANSL1L
Wikipedia pathwaysKANSL1L
Orthology - Evolution
OrthoDB151050
GeneTree (enSembl)ENSG00000144445
Phylogenetic Trees/Animal Genes : TreeFamKANSL1L
HOVERGENA0AUZ9
HOGENOMA0AUZ9
Homologs : HomoloGeneKANSL1L
Homology/Alignments : Family Browser (UCSC)KANSL1L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKANSL1L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KANSL1L
dbVarKANSL1L
ClinVarKANSL1L
1000_GenomesKANSL1L 
Exome Variant ServerKANSL1L
ExAC (Exome Aggregation Consortium)KANSL1L (select the gene name)
Genetic variants : HAPMAP151050
Genomic Variants (DGV)KANSL1L [DGVbeta]
DECIPHERKANSL1L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKANSL1L 
Mutations
ICGC Data PortalKANSL1L 
TCGA Data PortalKANSL1L 
Broad Tumor PortalKANSL1L
OASIS PortalKANSL1L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKANSL1L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KANSL1L
DgiDB (Drug Gene Interaction Database)KANSL1L
DoCM (Curated mutations)KANSL1L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KANSL1L (select a term)
intoGenKANSL1L
Cancer3DKANSL1L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613833   
Orphanet
MedgenKANSL1L
Genetic Testing Registry KANSL1L
NextProtA0AUZ9 [Medical]
TSGene151050
GENETestsKANSL1L
Target ValidationKANSL1L
Huge Navigator KANSL1L [HugePedia]
snp3D : Map Gene to Disease151050
BioCentury BCIQKANSL1L
ClinGenKANSL1L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD151050
Chemical/Pharm GKB GenePA162379439
Clinical trialKANSL1L
Miscellaneous
canSAR (ICR)KANSL1L (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKANSL1L
EVEXKANSL1L
GoPubMedKANSL1L
iHOPKANSL1L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:53:56 CEST 2017

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