Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KBTBD11-OT1 (KBTBD11 overlapping transcript 1)

Identity

Alias_namesKBTBD11 overlapping transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) KBTBD11-OT1
LocusID (NCBI) 104266957
Atlas_Id 77717
Location 8p23.3  [Link to chromosome band 8p23]
Location_base_pair Starts at 1971397 and ends at 1976444 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KBTBD11-OT1   49147
Cards
Entrez_Gene (NCBI)KBTBD11-OT1  104266957  KBTBD11 overlapping transcript 1
Aliases
GeneCards (Weizmann)KBTBD11-OT1
Ensembl hg19 (Hinxton)ENSG00000253696 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253696 [Gene_View]  chr8:1971397-1976444 [Contig_View]  KBTBD11-OT1 [Vega]
ICGC DataPortalENSG00000253696
TCGA cBioPortalKBTBD11-OT1
AceView (NCBI)KBTBD11-OT1
Genatlas (Paris)KBTBD11-OT1
WikiGenes104266957
SOURCE (Princeton)KBTBD11-OT1
Genetics Home Reference (NIH)KBTBD11-OT1
Genomic and cartography
GoldenPath hg38 (UCSC)KBTBD11-OT1  -     chr8:1971397-1976444 +  8p23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KBTBD11-OT1  -     8p23.3   [Description]    (hg19-Feb_2009)
EnsemblKBTBD11-OT1 - 8p23.3 [CytoView hg19]  KBTBD11-OT1 - 8p23.3 [CytoView hg38]
Mapping of homologs : NCBIKBTBD11-OT1 [Mapview hg19]  KBTBD11-OT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX104191
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_187576
Consensus coding sequences : CCDS (NCBI)KBTBD11-OT1
Cluster EST : UnigeneHs.734498 [ NCBI ]
CGAP (NCI)Hs.734498
Alternative Splicing GalleryENSG00000253696
Gene ExpressionKBTBD11-OT1 [ NCBI-GEO ]   KBTBD11-OT1 [ EBI - ARRAY_EXPRESS ]   KBTBD11-OT1 [ SEEK ]   KBTBD11-OT1 [ MEM ]
Gene Expression Viewer (FireBrowse)KBTBD11-OT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104266957
GTEX Portal (Tissue expression)KBTBD11-OT1
Human Protein AtlasENSG00000253696-KBTBD11-OT1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KBTBD11-OT1
DMDM Disease mutations104266957
Blocks (Seattle)KBTBD11-OT1
Human Protein Atlas [tissue]ENSG00000253696-KBTBD11-OT1 [tissue]
Protein Interaction databases
FunCoupENSG00000253696
BioGRIDKBTBD11-OT1
STRING (EMBL)KBTBD11-OT1
ZODIACKBTBD11-OT1
Ontologies - Pathways
Huge Navigator KBTBD11-OT1 [HugePedia]
snp3D : Map Gene to Disease104266957
BioCentury BCIQKBTBD11-OT1
ClinGenKBTBD11-OT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104266957
Clinical trialKBTBD11-OT1
Miscellaneous
canSAR (ICR)KBTBD11-OT1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineKBTBD11-OT1
EVEXKBTBD11-OT1
GoPubMedKBTBD11-OT1
iHOPKBTBD11-OT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:16 CET 2017

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