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KBTBD6 (kelch repeat and BTB (POZ) domain containing 6)

Identity

Alias_nameskelch repeat and BTB (POZ) domain containing 6
Alias_symbol (synonym)DKFZp547E1912
Other alias-
HGNC (Hugo) KBTBD6
LocusID (NCBI) 89890
Atlas_Id 64754
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 41701709 and ends at 41706936 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KBTBD6   25340
Cards
Entrez_Gene (NCBI)KBTBD6  89890  kelch repeat and BTB (POZ) domain containing 6
Aliases
GeneCards (Weizmann)KBTBD6
Ensembl hg19 (Hinxton)ENSG00000165572 [Gene_View]  chr13:41701709-41706936 [Contig_View]  KBTBD6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000165572 [Gene_View]  chr13:41701709-41706936 [Contig_View]  KBTBD6 [Vega]
ICGC DataPortalENSG00000165572
TCGA cBioPortalKBTBD6
AceView (NCBI)KBTBD6
Genatlas (Paris)KBTBD6
WikiGenes89890
SOURCE (Princeton)KBTBD6
Genetics Home Reference (NIH)KBTBD6
Genomic and cartography
GoldenPath hg19 (UCSC)KBTBD6  -     chr13:41701709-41706936 -  13q14.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KBTBD6  -     13q14.11   [Description]    (hg38-Dec_2013)
EnsemblKBTBD6 - 13q14.11 [CytoView hg19]  KBTBD6 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBIKBTBD6 [Mapview hg19]  KBTBD6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023475 AK056633 AK095195 AK096608 AK299627
RefSeq transcript (Entrez)NM_152903
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)KBTBD6
Cluster EST : UnigeneHs.534040 [ NCBI ]
CGAP (NCI)Hs.534040
Alternative Splicing GalleryENSG00000165572
Gene ExpressionKBTBD6 [ NCBI-GEO ]   KBTBD6 [ EBI - ARRAY_EXPRESS ]   KBTBD6 [ SEEK ]   KBTBD6 [ MEM ]
Gene Expression Viewer (FireBrowse)KBTBD6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)89890
GTEX Portal (Tissue expression)KBTBD6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86V97   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86V97  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86V97
Splice isoforms : SwissVarQ86V97
PhosPhoSitePlusQ86V97
Domaine pattern : Prosite (Expaxy)BTB (PS50097)   
Domains : Interpro (EBI)BACK    BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Kelch-typ_b-propeller    Kelch_1   
Domain families : Pfam (Sanger)BACK (PF07707)    BTB (PF00651)    Kelch_1 (PF01344)   
Domain families : Pfam (NCBI)pfam07707    pfam00651    pfam01344   
Domain families : Smart (EMBL)BACK (SM00875)  BTB (SM00225)  Kelch (SM00612)  
Conserved Domain (NCBI)KBTBD6
DMDM Disease mutations89890
Blocks (Seattle)KBTBD6
PDB (SRS)4XC2   
PDB (PDBSum)4XC2   
PDB (IMB)4XC2   
PDB (RSDB)4XC2   
Structural Biology KnowledgeBase4XC2   
SCOP (Structural Classification of Proteins)4XC2   
CATH (Classification of proteins structures)4XC2   
SuperfamilyQ86V97
Human Protein AtlasENSG00000165572
Peptide AtlasQ86V97
HPRD13758
IPIIPI00332050   IPI00910405   
Protein Interaction databases
DIP (DOE-UCLA)Q86V97
IntAct (EBI)Q86V97
FunCoupENSG00000165572
BioGRIDKBTBD6
STRING (EMBL)KBTBD6
ZODIACKBTBD6
Ontologies - Pathways
QuickGOQ86V97
Ontology : AmiGOmolecular_function  protein binding  cellular_component  biological_process  
Ontology : EGO-EBImolecular_function  protein binding  cellular_component  biological_process  
NDEx NetworkKBTBD6
Atlas of Cancer Signalling NetworkKBTBD6
Wikipedia pathwaysKBTBD6
Orthology - Evolution
OrthoDB89890
GeneTree (enSembl)ENSG00000165572
Phylogenetic Trees/Animal Genes : TreeFamKBTBD6
HOVERGENQ86V97
HOGENOMQ86V97
Homologs : HomoloGeneKBTBD6
Homology/Alignments : Family Browser (UCSC)KBTBD6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKBTBD6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KBTBD6
dbVarKBTBD6
ClinVarKBTBD6
1000_GenomesKBTBD6 
Exome Variant ServerKBTBD6
ExAC (Exome Aggregation Consortium)KBTBD6 (select the gene name)
Genetic variants : HAPMAP89890
Genomic Variants (DGV)KBTBD6 [DGVbeta]
DECIPHER (Syndromes)13:41701709-41706936  ENSG00000165572
CONAN: Copy Number AnalysisKBTBD6 
Mutations
ICGC Data PortalKBTBD6 
TCGA Data PortalKBTBD6 
Broad Tumor PortalKBTBD6
OASIS PortalKBTBD6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKBTBD6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKBTBD6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KBTBD6
DgiDB (Drug Gene Interaction Database)KBTBD6
DoCM (Curated mutations)KBTBD6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KBTBD6 (select a term)
intoGenKBTBD6
Cancer3DKBTBD6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKBTBD6
Genetic Testing Registry KBTBD6
NextProtQ86V97 [Medical]
TSGene89890
GENETestsKBTBD6
Huge Navigator KBTBD6 [HugePedia]
snp3D : Map Gene to Disease89890
BioCentury BCIQKBTBD6
ClinGenKBTBD6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD89890
Chemical/Pharm GKB GenePA134955690
Clinical trialKBTBD6
Miscellaneous
canSAR (ICR)KBTBD6 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKBTBD6
EVEXKBTBD6
GoPubMedKBTBD6
iHOPKBTBD6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:19 CET 2017

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