Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KCCAT198 (renal clear cell carcinoma-associated transcript 198)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105369954
Atlas_Id 55259
Location 12q23.3  [Link to chromosome band 12q23]
Location_base_pair Starts at 105304867 and ends at 105327017 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)KCCAT198  105369954  renal clear cell carcinoma-associated transcript 198
Aliases
GeneCards (Weizmann)KCCAT198
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:105304867-105327017 [Contig_View]  KCCAT198 [Vega]
TCGA cBioPortalKCCAT198
AceView (NCBI)KCCAT198
Genatlas (Paris)KCCAT198
WikiGenes105369954
SOURCE (Princeton)KCCAT198
Genetics Home Reference (NIH)KCCAT198
Genomic and cartography
GoldenPath hg38 (UCSC)KCCAT198  -     chr12:105304867-105327017 -  12q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCCAT198  -     12q23.3   [Description]    (hg19-Feb_2009)
EnsemblKCCAT198 - 12q23.3 [CytoView hg19]  KCCAT198 - 12q23.3 [CytoView hg38]
Mapping of homologs : NCBIKCCAT198 [Mapview hg19]  KCCAT198 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA686940
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCCAT198
Cluster EST : UnigeneHs.368938 [ NCBI ]
CGAP (NCI)Hs.368938
Gene ExpressionKCCAT198 [ NCBI-GEO ]   KCCAT198 [ EBI - ARRAY_EXPRESS ]   KCCAT198 [ SEEK ]   KCCAT198 [ MEM ]
Gene Expression Viewer (FireBrowse)KCCAT198 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105369954
GTEX Portal (Tissue expression)KCCAT198
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KCCAT198
DMDM Disease mutations105369954
Blocks (Seattle)KCCAT198
Protein Interaction databases
BioGRIDKCCAT198
STRING (EMBL)KCCAT198
ZODIACKCCAT198
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105369954
BioCentury BCIQKCCAT198
ClinGenKCCAT198
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105369954
Clinical trialKCCAT198
Miscellaneous
canSAR (ICR)KCCAT198 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCCAT198
EVEXKCCAT198
GoPubMedKCCAT198
iHOPKCCAT198
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:39:09 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.