KCNA5 (potassium voltage-gated channel, shaker-related subfamily, member 5)

Identity

Other names	HCK1
	HK2
	HPCN1
	KV1.5
	MGC117058
	MGC117059
	PCN1
HGNC	KCNA5
Location	12p13
Location_base_pair	Starts at 5023346 and ends at 5026210 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	KCNA5   6224
Entrez_Gene	KCNA5  3741  potassium voltage-gated channel, shaker-related subfamily, member 5
	Cards
GeneCards	KCNA5
Ensembl	KCNA5 [Search_View]   ENSG00000130037 [Gene_View]
Genatlas	KCNA5
GeneLynx	KCNA5
eGenome	KCNA5
euGene	3741
	Genomic and cartography
GoldenPath	KCNA5  -  12p13   chr12:5023346-5026210 +  12p13.32   [Description]    (hg18-March_2006)
Ensembl	KCNA5 - 12p13.32 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	KCNA5
	Gene and transcription
Genbank	BC096357 [ ENTREZ ]
Genbank	BC096358 [ ENTREZ ]
Genbank	BC099665 [ ENTREZ ]
Genbank	BC099666 [ ENTREZ ]
Genbank	M55513 [ ENTREZ ]
RefSeq	NM_002234 [ SRS ]    NM_002234 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009759 [ SRS ]    NT_009759 [ ENTREZ ]
RefSeq	NW_001838049 [ SRS ]    NW_001838049 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	KCNA5 AceView - NCBI
Unigene	Hs.150208 [ SRS ]    Hs.150208 [ NCBI ]     HS150208 [ spliceNest ]
Fast-db	813 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P22460 [ SRS]    P22460 [ EXPASY ]     P22460 [ INTERPRO ]     P22460 [ UNIPROT ]
Interpro	IPR000210 BTB/POZ-like [ SRS ]    IPR000210 BTB/POZ-like [ EBI ]
Interpro	IPR011333 BTB/POZ_fold [ SRS ]    IPR011333 BTB/POZ_fold [ EBI ]
Interpro	IPR005821 Ion_trans [ SRS ]    IPR005821 Ion_trans [ EBI ]
Interpro	IPR003091 K_chnl [ SRS ]    IPR003091 K_chnl [ EBI ]
Interpro	IPR003968 K_chnl_volt-dep_Kv [ SRS ]    IPR003968 K_chnl_volt-dep_Kv [ EBI ]
Interpro	IPR003972 K_chnl_volt-dep_Kv1 [ SRS ]    IPR003972 K_chnl_volt-dep_Kv1 [ EBI ]
Interpro	IPR004052 K_chnl_volt-dep_Kv1.5 [ SRS ]    IPR004052 K_chnl_volt-dep_Kv1.5 [ EBI ]
Interpro	IPR003131 K_chnl_volt-dep_Kv_tetra [ SRS ]    IPR003131 K_chnl_volt-dep_Kv_tetra [ EBI ]
CluSTr	P22460
Pfam	PF00520 Ion_trans [ SRS ]    PF00520 Ion_trans [ Sanger ]    pfam00520 [ NCBI-CDD ]
Pfam	PF02214 K_tetra [ SRS ]    PF02214 K_tetra [ Sanger ]    pfam02214 [ NCBI-CDD ]
Smart	SM00225 BTB [EMBL]
Blocks	P22460
HPRD	08888
	Protein Interaction databases
DIP	P22460
IntAct	P22460
	Polymorphism : SNP, mutations, diseases
OMIM	176267    [ map ]
GENECLINICS	176267
SNP	KCNA5 [dbSNP-NCBI]
SNP	NM_002234 [SNP-NCI]
SNP	KCNA5 [GeneSNPs - Utah]  KCNA5] [HGBASE - SRS]
HAPMAP	KCNA5 [HAPMAP]
COSMIC	KCNA5 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	KCNA5
	General knowledge
Family Browser	KCNA5 [UCSC Family Browser]
SOURCE	NM_002234
SMD	Hs.150208
SAGE	Hs.150208
GO	voltage-gated ion channel activity [Amigo]  voltage-gated ion channel activity
GO	delayed rectifier potassium channel activity [Amigo]  delayed rectifier potassium channel activity
GO	protein binding [Amigo]  protein binding
GO	Golgi apparatus [Amigo]  Golgi apparatus
GO	plasma membrane [Amigo]  plasma membrane
GO	ion transport [Amigo]  ion transport
GO	potassium ion transport [Amigo]  potassium ion transport
GO	voltage-gated potassium channel complex [Amigo]  voltage-gated potassium channel complex
GO	integral to membrane [Amigo]  integral to membrane
GO	potassium ion binding [Amigo]  potassium ion binding
GO	regulation of membrane potential [Amigo]  regulation of membrane potential
PubGene	KCNA5
TreeFam	KCNA5
CTD	3741 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	KCNA5 Related clones (RZPD - Berlin)
	PubMed
PubMed	52 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:47:25 2008