KCNA6 (potassium voltage-gated channel, shaker-related subfamily, member 6)

Identity

Other names	HBK2
	KV1.6
HGNC	KCNA6
Location	12p13
Location_base_pair	Starts at 4788603 and ends at 4792839 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

External links

	Nomenclature
HGNC	KCNA6   6225
Entrez_Gene	KCNA6  3742  potassium voltage-gated channel, shaker-related subfamily, member 6
	Cards
GeneCards	KCNA6
Ensembl	KCNA6 [Search_View]   ENSG00000151079 [Gene_View]
Genatlas	KCNA6
GeneLynx	KCNA6
eGenome	KCNA6
euGene	3742
	Genomic and cartography
GoldenPath	KCNA6  -  12p13   chr12:4788603-4792839 +  12p13.32   [Description]    (hg18-March_2006)
Ensembl	KCNA6 - 12p13.32 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	KCNA6
	Gene and transcription
Genbank	BC069355 [ ENTREZ ]
Genbank	X17622 [ ENTREZ ]
RefSeq	NM_002235 [ SRS ]    NM_002235 [ ENTREZ ]
RefSeq	AC_000055 [ SRS ]    AC_000055 [ ENTREZ ]
RefSeq	AC_000144 [ SRS ]    AC_000144 [ ENTREZ ]
RefSeq	NC_000012 [ SRS ]    NC_000012 [ ENTREZ ]
RefSeq	NT_009759 [ SRS ]    NT_009759 [ ENTREZ ]
RefSeq	NW_001838049 [ SRS ]    NW_001838049 [ ENTREZ ]
RefSeq	NW_925295 [ SRS ]    NW_925295 [ ENTREZ ]
AceView	KCNA6 AceView - NCBI
Unigene	Hs.306190 [ SRS ]    Hs.306190 [ NCBI ]     HS306190 [ spliceNest ]
	Protein : pattern, domain, 3D structure
SwissProt	P17658 [ SRS]    P17658 [ EXPASY ]     P17658 [ INTERPRO ]     P17658 [ UNIPROT ]
Interpro	IPR000210 BTB/POZ-like [ SRS ]    IPR000210 BTB/POZ-like [ EBI ]
Interpro	IPR011333 BTB/POZ_fold [ SRS ]    IPR011333 BTB/POZ_fold [ EBI ]
Interpro	IPR005821 Ion_trans [ SRS ]    IPR005821 Ion_trans [ EBI ]
Interpro	IPR003091 K_chnl [ SRS ]    IPR003091 K_chnl [ EBI ]
Interpro	IPR003968 K_chnl_volt-dep_Kv [ SRS ]    IPR003968 K_chnl_volt-dep_Kv [ EBI ]
Interpro	IPR003972 K_chnl_volt-dep_Kv1 [ SRS ]    IPR003972 K_chnl_volt-dep_Kv1 [ EBI ]
Interpro	IPR004053 K_chnl_volt-dep_Kv1.6 [ SRS ]    IPR004053 K_chnl_volt-dep_Kv1.6 [ EBI ]
Interpro	IPR003131 K_chnl_volt-dep_Kv_tetra [ SRS ]    IPR003131 K_chnl_volt-dep_Kv_tetra [ EBI ]
CluSTr	P17658
Pfam	PF00520 Ion_trans [ SRS ]    PF00520 Ion_trans [ Sanger ]    pfam00520 [ NCBI-CDD ]
Pfam	PF02214 K_tetra [ SRS ]    PF02214 K_tetra [ Sanger ]    pfam02214 [ NCBI-CDD ]
Smart	SM00225 BTB [EMBL]
Blocks	P17658
HPRD	08884
	Protein Interaction databases
DIP	P17658
IntAct	P17658
	Polymorphism : SNP, mutations, diseases
OMIM	176257    [ map ]
GENECLINICS	176257
SNP	KCNA6 [dbSNP-NCBI]
SNP	NM_002235 [SNP-NCI]
SNP	KCNA6 [GeneSNPs - Utah]  KCNA6] [HGBASE - SRS]
HAPMAP	KCNA6 [HAPMAP]
HGMD	KCNA6
	General knowledge
Family Browser	KCNA6 [UCSC Family Browser]
SOURCE	NM_002235
SMD	Hs.306190
SAGE	Hs.306190
GO	voltage-gated ion channel activity [Amigo]  voltage-gated ion channel activity
GO	voltage-gated potassium channel activity [Amigo]  voltage-gated potassium channel activity
GO	protein binding [Amigo]  protein binding
GO	ion transport [Amigo]  ion transport
GO	potassium ion transport [Amigo]  potassium ion transport
GO	voltage-gated potassium channel complex [Amigo]  voltage-gated potassium channel complex
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	potassium ion binding [Amigo]  potassium ion binding
PubGene	KCNA6
TreeFam	KCNA6
CTD	3742 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	KCNA6 Related clones (RZPD - Berlin)
	PubMed
PubMed	7 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:47:25 2008