Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNG1 (potassium voltage-gated channel modifier subfamily G member 1)

Identity

Alias (NCBI)K13
KCNG
KV6.1
kH2
HGNC (Hugo) KCNG1
HGNC Alias symbKv6.1
kH2
K13
HGNC Previous nameKCNG
HGNC Previous namepotassium voltage-gated channel, subfamily G, member 1
LocusID (NCBI) 3755
Atlas_Id 64777
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 51003656 and ends at 51023107 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADNP (20q13.13) / KCNG1 (20q13.13)CPT1A (11q13.3) / KCNG1 (20q13.13)KCNG1 (20q13.13) / PRNP (20p13)
CPT1A KCNG1ADNP KCNG1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)KCNG1   6248
Cards
Entrez_Gene (NCBI)KCNG1    potassium voltage-gated channel modifier subfamily G member 1
AliasesK13; KCNG; KV6.1; kH2
GeneCards (Weizmann)KCNG1
Ensembl hg19 (Hinxton)ENSG00000026559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000026559 [Gene_View]  ENSG00000026559 [Sequence]  chr20:51003656-51023107 [Contig_View]  KCNG1 [Vega]
ICGC DataPortalENSG00000026559
TCGA cBioPortalKCNG1
AceView (NCBI)KCNG1
Genatlas (Paris)KCNG1
SOURCE (Princeton)KCNG1
Genetics Home Reference (NIH)KCNG1
Genomic and cartography
GoldenPath hg38 (UCSC)KCNG1  -     chr20:51003656-51023107 -  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNG1  -     20q13.13   [Description]    (hg19-Feb_2009)
GoldenPathKCNG1 - 20q13.13 [CytoView hg19]  KCNG1 - 20q13.13 [CytoView hg38]
ImmunoBaseENSG00000026559
Genome Data Viewer NCBIKCNG1 [Mapview hg19]  
OMIM603788   
Gene and transcription
Genbank (Entrez)AF033383 AK290689 AW162513 BC006367 BC046629
RefSeq transcript (Entrez)NM_002237 NM_172318
Consensus coding sequences : CCDS (NCBI)KCNG1
Gene ExpressionKCNG1 [ NCBI-GEO ]   KCNG1 [ EBI - ARRAY_EXPRESS ]   KCNG1 [ SEEK ]   KCNG1 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNG1 [ Firebrowse - Broad ]
GenevisibleExpression of KCNG1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3755
GTEX Portal (Tissue expression)KCNG1
Human Protein AtlasENSG00000026559-KCNG1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UIX4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UIX4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UIX4
PhosPhoSitePlusQ9UIX4
Domains : Interpro (EBI)BTB/POZ_dom    Ion_trans_dom    K_chnl_volt-dep_Kv    K_chnl_volt-dep_Kv6    SKP1/BTB/POZ_sf    T1-type_BTB    VG_K_chnl    Volt_channel_dom_sf   
Domain families : Pfam (Sanger)BTB_2 (PF02214)    Ion_trans (PF00520)   
Domain families : Pfam (NCBI)pfam02214    pfam00520   
Domain families : Smart (EMBL)BTB (SM00225)  
Conserved Domain (NCBI)KCNG1
SuperfamilyQ9UIX4
AlphaFold pdb e-kbQ9UIX4   
Human Protein Atlas [tissue]ENSG00000026559-KCNG1 [tissue]
HPRD04809
Protein Interaction databases
DIP (DOE-UCLA)Q9UIX4
IntAct (EBI)Q9UIX4
BioGRIDKCNG1
STRING (EMBL)KCNG1
ZODIACKCNG1
Ontologies - Pathways
QuickGOQ9UIX4
Ontology : AmiGOvoltage-gated potassium channel activity  delayed rectifier potassium channel activity  delayed rectifier potassium channel activity  delayed rectifier potassium channel activity  potassium channel activity  plasma membrane  plasma membrane  plasma membrane  potassium ion transport  integral component of membrane  protein homooligomerization  potassium ion transmembrane transport  potassium ion transmembrane transport  potassium ion transmembrane transport  potassium ion transmembrane transport  regulation of delayed rectifier potassium channel activity  regulation of delayed rectifier potassium channel activity  
Ontology : EGO-EBIvoltage-gated potassium channel activity  delayed rectifier potassium channel activity  delayed rectifier potassium channel activity  delayed rectifier potassium channel activity  potassium channel activity  plasma membrane  plasma membrane  plasma membrane  potassium ion transport  integral component of membrane  protein homooligomerization  potassium ion transmembrane transport  potassium ion transmembrane transport  potassium ion transmembrane transport  potassium ion transmembrane transport  regulation of delayed rectifier potassium channel activity  regulation of delayed rectifier potassium channel activity  
NDEx NetworkKCNG1
Atlas of Cancer Signalling NetworkKCNG1
Wikipedia pathwaysKCNG1
Orthology - Evolution
OrthoDB3755
GeneTree (enSembl)ENSG00000026559
Phylogenetic Trees/Animal Genes : TreeFamKCNG1
Homologs : HomoloGeneKCNG1
Homology/Alignments : Family Browser (UCSC)KCNG1
Gene fusions - Rearrangements
Fusion : QuiverKCNG1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKCNG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KCNG1
dbVarKCNG1
ClinVarKCNG1
MonarchKCNG1
1000_GenomesKCNG1 
Exome Variant ServerKCNG1
GNOMAD BrowserENSG00000026559
Varsome BrowserKCNG1
ACMGKCNG1 variants
VarityQ9UIX4
Genomic Variants (DGV)KCNG1 [DGVbeta]
DECIPHERKCNG1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKCNG1 
Mutations
ICGC Data PortalKCNG1 
TCGA Data PortalKCNG1 
Broad Tumor PortalKCNG1
OASIS PortalKCNG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKCNG1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DKCNG1
Mutations and Diseases : HGMDKCNG1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaKCNG1
DgiDB (Drug Gene Interaction Database)KCNG1
DoCM (Curated mutations)KCNG1
CIViC (Clinical Interpretations of Variants in Cancer)KCNG1
Cancer3DKCNG1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603788   
Orphanet
DisGeNETKCNG1
MedgenKCNG1
Genetic Testing Registry KCNG1
NextProtQ9UIX4 [Medical]
GENETestsKCNG1
Target ValidationKCNG1
Huge Navigator KCNG1 [HugePedia]
ClinGenKCNG1
Clinical trials, drugs, therapy
MyCancerGenomeKCNG1
Protein Interactions : CTDKCNG1
Pharm GKB GenePA30034
PharosQ9UIX4
Clinical trialKCNG1
Miscellaneous
canSAR (ICR)KCNG1
HarmonizomeKCNG1
DataMed IndexKCNG1
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXKCNG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:54:18 CEST 2021

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