Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNG2 (potassium channel, voltage gated modifier subfamily G, member 2)

Identity

Alias_namespotassium voltage-gated channel, subfamily G, member 2
Alias_symbol (synonym)Kv6.2
KCNF2
Other aliasKV6.2
HGNC (Hugo) KCNG2
LocusID (NCBI) 26251
Atlas_Id 64778
Location 18q23  [Link to chromosome band 18q23]
Location_base_pair Starts at 77623668 and ends at 77659816 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNG2   6249
Cards
Entrez_Gene (NCBI)KCNG2  26251  potassium channel, voltage gated modifier subfamily G, member 2
AliasesKCNF2; KV6.2
GeneCards (Weizmann)KCNG2
Ensembl hg19 (Hinxton)ENSG00000178342 [Gene_View]  chr18:77623668-77659816 [Contig_View]  KCNG2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000178342 [Gene_View]  chr18:77623668-77659816 [Contig_View]  KCNG2 [Vega]
ICGC DataPortalENSG00000178342
TCGA cBioPortalKCNG2
AceView (NCBI)KCNG2
Genatlas (Paris)KCNG2
WikiGenes26251
SOURCE (Princeton)KCNG2
Genetics Home Reference (NIH)KCNG2
Genomic and cartography
GoldenPath hg19 (UCSC)KCNG2  -     chr18:77623668-77659816 +  18q23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KCNG2  -     18q23   [Description]    (hg38-Dec_2013)
EnsemblKCNG2 - 18q23 [CytoView hg19]  KCNG2 - 18q23 [CytoView hg38]
Mapping of homologs : NCBIKCNG2 [Mapview hg19]  KCNG2 [Mapview hg38]
OMIM605696   
Gene and transcription
Genbank (Entrez)AJ011021 AK308622 BC169276 BC169278
RefSeq transcript (Entrez)NM_012283
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929411
Consensus coding sequences : CCDS (NCBI)KCNG2
Cluster EST : UnigeneHs.247905 [ NCBI ]
CGAP (NCI)Hs.247905
Alternative Splicing GalleryENSG00000178342
Gene ExpressionKCNG2 [ NCBI-GEO ]   KCNG2 [ EBI - ARRAY_EXPRESS ]   KCNG2 [ SEEK ]   KCNG2 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNG2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26251
GTEX Portal (Tissue expression)KCNG2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJ96   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJ96  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJ96
Splice isoforms : SwissVarQ9UJ96
PhosPhoSitePlusQ9UJ96
Domains : Interpro (EBI)BTB/POZ-like    BTB/POZ_fold    Channel_four-helix_dom    Ion_trans_dom    K_chnl    K_chnl_volt-dep_Kv    K_chnl_volt-dep_Kv6    T1-type_BTB    VG_K_chnl   
Domain families : Pfam (Sanger)BTB_2 (PF02214)    Ion_trans (PF00520)   
Domain families : Pfam (NCBI)pfam02214    pfam00520   
Domain families : Smart (EMBL)BTB (SM00225)  
Conserved Domain (NCBI)KCNG2
DMDM Disease mutations26251
Blocks (Seattle)KCNG2
SuperfamilyQ9UJ96
Human Protein AtlasENSG00000178342
Peptide AtlasQ9UJ96
HPRD12036
IPIIPI00017521   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJ96
IntAct (EBI)Q9UJ96
FunCoupENSG00000178342
BioGRIDKCNG2
STRING (EMBL)KCNG2
ZODIACKCNG2
Ontologies - Pathways
QuickGOQ9UJ96
Ontology : AmiGOdelayed rectifier potassium channel activity  plasma membrane  energy reserve metabolic process  potassium ion transport  synaptic transmission  regulation of heart contraction  voltage-gated potassium channel complex  integral component of membrane  regulation of ion transmembrane transport  small molecule metabolic process  regulation of insulin secretion  protein homooligomerization  extracellular exosome  potassium ion transmembrane transport  
Ontology : EGO-EBIdelayed rectifier potassium channel activity  plasma membrane  energy reserve metabolic process  potassium ion transport  synaptic transmission  regulation of heart contraction  voltage-gated potassium channel complex  integral component of membrane  regulation of ion transmembrane transport  small molecule metabolic process  regulation of insulin secretion  protein homooligomerization  extracellular exosome  potassium ion transmembrane transport  
NDEx NetworkKCNG2
Atlas of Cancer Signalling NetworkKCNG2
Wikipedia pathwaysKCNG2
Orthology - Evolution
OrthoDB26251
GeneTree (enSembl)ENSG00000178342
Phylogenetic Trees/Animal Genes : TreeFamKCNG2
HOVERGENQ9UJ96
HOGENOMQ9UJ96
Homologs : HomoloGeneKCNG2
Homology/Alignments : Family Browser (UCSC)KCNG2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKCNG2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KCNG2
dbVarKCNG2
ClinVarKCNG2
1000_GenomesKCNG2 
Exome Variant ServerKCNG2
ExAC (Exome Aggregation Consortium)KCNG2 (select the gene name)
Genetic variants : HAPMAP26251
Genomic Variants (DGV)KCNG2 [DGVbeta]
DECIPHER (Syndromes)18:77623668-77659816  ENSG00000178342
CONAN: Copy Number AnalysisKCNG2 
Mutations
ICGC Data PortalKCNG2 
TCGA Data PortalKCNG2 
Broad Tumor PortalKCNG2
OASIS PortalKCNG2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKCNG2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKCNG2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KCNG2
DgiDB (Drug Gene Interaction Database)KCNG2
DoCM (Curated mutations)KCNG2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KCNG2 (select a term)
intoGenKCNG2
Cancer3DKCNG2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605696   
Orphanet
MedgenKCNG2
Genetic Testing Registry KCNG2
NextProtQ9UJ96 [Medical]
TSGene26251
GENETestsKCNG2
Huge Navigator KCNG2 [HugePedia]
snp3D : Map Gene to Disease26251
BioCentury BCIQKCNG2
ClinGenKCNG2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26251
Chemical/Pharm GKB GenePA30035
Clinical trialKCNG2
Miscellaneous
canSAR (ICR)KCNG2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNG2
EVEXKCNG2
GoPubMedKCNG2
iHOPKCNG2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:09:24 CET 2017

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