Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNH2 (potassium voltage-gated channel subfamily H member 2)

Identity

Alias (NCBI)ERG-1
ERG1
H-ERG
HERG
HERG1
Kv11.1
LQT2
SQT1
HGNC (Hugo) KCNH2
HGNC Alias symbKv11.1
HERG
erg1
HGNC Alias namehuman ether-a-go-go-related gene
 long QT syndrome type 2
HGNC Previous nameLQT2
HGNC Previous namepotassium voltage-gated channel, subfamily H (eag-related), member 2
LocusID (NCBI) 3757
Atlas_Id 45971
Location 7q36.1  [Link to chromosome band 7q36]
Location_base_pair Starts at 150944956 and ends at 150955829 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CREB5 (7p15.1)::KCNH2 (7q36.1)NEAT1 (11q13.1)::KCNH2 (7q36.1)CREB5 7p15.1::KCNH2 7q36.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)KCNH2   6251
LRG (Locus Reference Genomic)LRG_288
Cards
Entrez_Gene (NCBI)KCNH2    potassium voltage-gated channel subfamily H member 2
AliasesERG-1; ERG1; H-ERG; HERG; 
HERG1; Kv11.1; LQT2; SQT1
GeneCards (Weizmann)KCNH2
Ensembl hg19 (Hinxton)ENSG00000055118 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000055118 [Gene_View]  ENSG00000055118 [Sequence]  chr7:150944956-150955829 [Contig_View]  KCNH2 [Vega]
ICGC DataPortalENSG00000055118
TCGA cBioPortalKCNH2
AceView (NCBI)KCNH2
Genatlas (Paris)KCNH2
SOURCE (Princeton)KCNH2
Genetics Home Reference (NIH)KCNH2
Genomic and cartography
GoldenPath hg38 (UCSC)KCNH2  -     chr7:150944956-150955829 -  7q36.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNH2  -     7q36.1   [Description]    (hg19-Feb_2009)
GoldenPathKCNH2 - 7q36.1 [CytoView hg19]  KCNH2 - 7q36.1 [CytoView hg38]
ImmunoBaseENSG00000055118
Genome Data Viewer NCBIKCNH2 [Mapview hg19]  
OMIM152427   609620   613688   
Gene and transcription
Genbank (Entrez)AB044806 AF052728 AF363636 AJ512214 AJ609614
RefSeq transcript (Entrez)NM_000238 NM_001204798 NM_172056 NM_172057
Consensus coding sequences : CCDS (NCBI)KCNH2
Gene ExpressionKCNH2 [ NCBI-GEO ]   KCNH2 [ EBI - ARRAY_EXPRESS ]   KCNH2 [ SEEK ]   KCNH2 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNH2 [ Firebrowse - Broad ]
GenevisibleExpression of KCNH2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3757
GTEX Portal (Tissue expression)KCNH2
Human Protein AtlasENSG00000055118-KCNH2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KCNH2
Human Protein Atlas [tissue]ENSG00000055118-KCNH2 [tissue]
HPRD01069
Protein Interaction databases
BioGRIDKCNH2
STRING (EMBL)KCNH2
ZODIACKCNH2
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXKCNH2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 12:39:24 CET 2022

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