Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNIP4-IT1 (KCNIP4 intronic transcript 1)

Identity

Alias_namesNCRNA00099
non-protein coding RNA 99
KCNIP4 intronic transcript 1 (non-protein coding)
Alias_symbol (synonym)UM9-5
Other aliasUM9(5)
HGNC (Hugo) KCNIP4-IT1
LocusID (NCBI) 359822
Atlas_Id 64784
Location 4p15.2  [Link to chromosome band 4p15]
Location_base_pair Starts at 21843341 and ends at 21853188 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNIP4-IT1   29895
Cards
Entrez_Gene (NCBI)KCNIP4-IT1  359822  KCNIP4 intronic transcript 1
AliasesNCRNA00099; UM9(5); UM9-5
GeneCards (Weizmann)KCNIP4-IT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:21843341-21853188 [Contig_View]  KCNIP4-IT1 [Vega]
TCGA cBioPortalKCNIP4-IT1
AceView (NCBI)KCNIP4-IT1
Genatlas (Paris)KCNIP4-IT1
WikiGenes359822
SOURCE (Princeton)KCNIP4-IT1
Genetics Home Reference (NIH)KCNIP4-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)KCNIP4-IT1  -     chr4:21843341-21853188 -  4p15.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNIP4-IT1  -     4p15.2   [Description]    (hg19-Feb_2009)
EnsemblKCNIP4-IT1 - 4p15.2 [CytoView hg19]  KCNIP4-IT1 - 4p15.2 [CytoView hg38]
Mapping of homologs : NCBIKCNIP4-IT1 [Mapview hg19]  KCNIP4-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY072607 AY072608 AY072611 BK000166
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCNIP4-IT1
Cluster EST : UnigeneHs.354058 [ NCBI ]
CGAP (NCI)Hs.354058
Gene ExpressionKCNIP4-IT1 [ NCBI-GEO ]   KCNIP4-IT1 [ EBI - ARRAY_EXPRESS ]   KCNIP4-IT1 [ SEEK ]   KCNIP4-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNIP4-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)359822
GTEX Portal (Tissue expression)KCNIP4-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KCNIP4-IT1
DMDM Disease mutations359822
Blocks (Seattle)KCNIP4-IT1
Protein Interaction databases
BioGRIDKCNIP4-IT1
STRING (EMBL)KCNIP4-IT1
ZODIACKCNIP4-IT1
Ontologies - Pathways
Huge Navigator KCNIP4-IT1 [HugePedia]
snp3D : Map Gene to Disease359822
BioCentury BCIQKCNIP4-IT1
ClinGenKCNIP4-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD359822
Chemical/Pharm GKB GenePA164723641
Clinical trialKCNIP4-IT1
Miscellaneous
canSAR (ICR)KCNIP4-IT1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNIP4-IT1
EVEXKCNIP4-IT1
GoPubMedKCNIP4-IT1
iHOPKCNIP4-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:54:07 CEST 2017

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