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KCNJ14 (potassium voltage-gated channel subfamily J member 14)

Identity

Alias_namespotassium inwardly-rectifying channel, subfamily J, member 14
Alias_symbol (synonym)Kir2.4
IRK4
Other aliasKIR2.4
HGNC (Hugo) KCNJ14
LocusID (NCBI) 3770
Atlas_Id 64787
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48455707 and ends at 48466110 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNJ14   6260
Cards
Entrez_Gene (NCBI)KCNJ14  3770  potassium voltage-gated channel subfamily J member 14
AliasesIRK4; KIR2.4
GeneCards (Weizmann)KCNJ14
Ensembl hg19 (Hinxton)ENSG00000182324 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182324 [Gene_View]  chr19:48455707-48466110 [Contig_View]  KCNJ14 [Vega]
ICGC DataPortalENSG00000182324
TCGA cBioPortalKCNJ14
AceView (NCBI)KCNJ14
Genatlas (Paris)KCNJ14
WikiGenes3770
SOURCE (Princeton)KCNJ14
Genetics Home Reference (NIH)KCNJ14
Genomic and cartography
GoldenPath hg38 (UCSC)KCNJ14  -     chr19:48455707-48466110 +  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNJ14  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblKCNJ14 - 19q13.33 [CytoView hg19]  KCNJ14 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBIKCNJ14 [Mapview hg19]  KCNJ14 [Mapview hg38]
OMIM603953   
Gene and transcription
Genbank (Entrez)AF081466 BC032682 BC035918 BM710116 BU739644
RefSeq transcript (Entrez)NM_013348 NM_170720
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCNJ14
Cluster EST : UnigeneHs.745133 [ NCBI ]
CGAP (NCI)Hs.745133
Alternative Splicing GalleryENSG00000182324
Gene ExpressionKCNJ14 [ NCBI-GEO ]   KCNJ14 [ EBI - ARRAY_EXPRESS ]   KCNJ14 [ SEEK ]   KCNJ14 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNJ14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)3770<.TD>/TV>
GTEX Portal (Tissue expression)KCNJ14
Human Protein AtlasENSG00000182324-KCNJ14 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UNX9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UNX9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UNX9
Splice isoforms : SwissVarQ9UNX9
PhosPhoSitePlusQ9UNX9
Domains : Interpro (EBI)Ig_E-set    K_chnl_inward-rec_Kir    K_chnl_inward-rec_Kir_cyto   
Domain families : Pfam (Sanger)IRK (PF01007)   
Domain families : Pfam (NCBI)pfam01007   
Conserved Domain (NCBI)KCNJ14
DMDM Disease mutations3770
Blocks (Seattle)KCNJ14
SuperfamilyQ9UNX9
Human Protein Atlas [tissue]ENSG00000182324-KCNJ14 [tissue]
Peptide AtlasQ9UNX9
HPRD04901
IPIIPI00002524   
Protein Interaction databases
DIP (DOE-UCLA)Q9UNX9
IntAct (EBI)Q9UNX9
FunCoupENSG00000182324
BioGRIDKCNJ14
STRING (EMBL)KCNJ14
ZODIACKCNJ14
Ontologies - Pathways
QuickGOQ9UNX9
Ontology : AmiGOinward rectifier potassium channel activity  plasma membrane  voltage-gated potassium channel complex  potassium ion import  dendrite  regulation of ion transmembrane transport  neuronal cell body  cardiac conduction  
Ontology : EGO-EBIinward rectifier potassium channel activity  plasma membrane  voltage-gated potassium channel complex  potassium ion import  dendrite  regulation of ion transmembrane transport  neuronal cell body  cardiac conduction  
Pathways : KEGGCholinergic synapse   
NDEx NetworkKCNJ14
Atlas of Cancer Signalling NetworkKCNJ14
Wikipedia pathwaysKCNJ14
Orthology - Evolution
OrthoDB3770
GeneTree (enSembl)ENSG00000182324
Phylogenetic Trees/Animal Genes : TreeFamKCNJ14
HOVERGENQ9UNX9
HOGENOMQ9UNX9
Homologs : HomoloGeneKCNJ14
Homology/Alignments : Family Browser (UCSC)KCNJ14
Gene fusions - Rearrangements
Tumor Fusion PortalKCNJ14
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKCNJ14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KCNJ14
dbVarKCNJ14
ClinVarKCNJ14
1000_GenomesKCNJ14 
Exome Variant ServerKCNJ14
ExAC (Exome Aggregation Consortium)ENSG00000182324
GNOMAD BrowserENSG00000182324
Genetic variants : HAPMAP3770
Genomic Variants (DGV)KCNJ14 [DGVbeta]
DECIPHERKCNJ14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKCNJ14 
Mutations
ICGC Data PortalKCNJ14 
TCGA Data PortalKCNJ14 
Broad Tumor PortalKCNJ14
OASIS PortalKCNJ14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKCNJ14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKCNJ14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KCNJ14
DgiDB (Drug Gene Interaction Database)KCNJ14
DoCM (Curated mutations)KCNJ14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KCNJ14 (select a term)
intoGenKCNJ14
Cancer3DKCNJ14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603953   
Orphanet
DisGeNETKCNJ14
MedgenKCNJ14
Genetic Testing Registry KCNJ14
NextProtQ9UNX9 [Medical]
TSGene3770
GENETestsKCNJ14
Target ValidationKCNJ14
Huge Navigator KCNJ14 [HugePedia]
snp3D : Map Gene to Disease3770
BioCentury BCIQKCNJ14
ClinGenKCNJ14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD3770
Chemical/Pharm GKB GenePA30045
Clinical trialKCNJ14
Miscellaneous
canSAR (ICR)KCNJ14 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNJ14
EVEXKCNJ14
GoPubMedKCNJ14
iHOPKCNJ14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:38:46 CET 2017

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