Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNK15 (potassium two pore domain channel subfamily K member 15)

Identity

Alias_namesKCNK11
KCNK14
potassium channel, subfamily K, member 15
potassium channel, two pore domain subfamily K, member 15
Alias_symbol (synonym)K2p15.1
dJ781B1.1
KT3.3
KIAA0237
TASK5
TASK-5
Other alias
HGNC (Hugo) KCNK15
LocusID (NCBI) 60598
Atlas_Id 64796
Location 20q13.12  [Link to chromosome band 20q13]
Location_base_pair Starts at 44745847 and ends at 44752313 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KCNK15 (20q13.12) / KCNK15 (20q13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNK15   13814
Cards
Entrez_Gene (NCBI)KCNK15  60598  potassium two pore domain channel subfamily K member 15
AliasesK2p15.1; KCNK11; KCNK14; KT3.3; 
TASK-5; TASK5; dJ781B1.1
GeneCards (Weizmann)KCNK15
Ensembl hg19 (Hinxton)ENSG00000124249 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124249 [Gene_View]  chr20:44745847-44752313 [Contig_View]  KCNK15 [Vega]
ICGC DataPortalENSG00000124249
TCGA cBioPortalKCNK15
AceView (NCBI)KCNK15
Genatlas (Paris)KCNK15
WikiGenes60598
SOURCE (Princeton)KCNK15
Genetics Home Reference (NIH)KCNK15
Genomic and cartography
GoldenPath hg38 (UCSC)KCNK15  -     chr20:44745847-44752313 +  20q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNK15  -     20q13.12   [Description]    (hg19-Feb_2009)
EnsemblKCNK15 - 20q13.12 [CytoView hg19]  KCNK15 - 20q13.12 [CytoView hg38]
Mapping of homologs : NCBIKCNK15 [Mapview hg19]  KCNK15 [Mapview hg38]
OMIM607368   
Gene and transcription
Genbank (Entrez)AF257081 AF294350 AF294351 AF336342 BC082981
RefSeq transcript (Entrez)NM_022358
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCNK15
Cluster EST : UnigeneHs.528664 [ NCBI ]
CGAP (NCI)Hs.528664
Alternative Splicing GalleryENSG00000124249
Gene ExpressionKCNK15 [ NCBI-GEO ]   KCNK15 [ EBI - ARRAY_EXPRESS ]   KCNK15 [ SEEK ]   KCNK15 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNK15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)60598
GTEX Portal (Tissue expression)KCNK15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H427   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H427  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H427
Splice isoforms : SwissVarQ9H427
PhosPhoSitePlusQ9H427
Domains : Interpro (EBI)2pore_dom_K_chnl    2pore_dom_K_chnl_TASK    K_chnl_dom    TASK5   
Domain families : Pfam (Sanger)Ion_trans_2 (PF07885)   
Domain families : Pfam (NCBI)pfam07885   
Conserved Domain (NCBI)KCNK15
DMDM Disease mutations60598
Blocks (Seattle)KCNK15
SuperfamilyQ9H427
Human Protein AtlasENSG00000124249
Peptide AtlasQ9H427
HPRD09564
IPIIPI00007134   
Protein Interaction databases
DIP (DOE-UCLA)Q9H427
IntAct (EBI)Q9H427
FunCoupENSG00000124249
BioGRIDKCNK15
STRING (EMBL)KCNK15
ZODIACKCNK15
Ontologies - Pathways
QuickGOQ9H427
Ontology : AmiGOvoltage-gated ion channel activity  potassium channel activity  plasma membrane  integral component of membrane  regulation of ion transmembrane transport  cardiac conduction  potassium ion transmembrane transport  
Ontology : EGO-EBIvoltage-gated ion channel activity  potassium channel activity  plasma membrane  integral component of membrane  regulation of ion transmembrane transport  cardiac conduction  potassium ion transmembrane transport  
NDEx NetworkKCNK15
Atlas of Cancer Signalling NetworkKCNK15
Wikipedia pathwaysKCNK15
Orthology - Evolution
OrthoDB60598
GeneTree (enSembl)ENSG00000124249
Phylogenetic Trees/Animal Genes : TreeFamKCNK15
HOVERGENQ9H427
HOGENOMQ9H427
Homologs : HomoloGeneKCNK15
Homology/Alignments : Family Browser (UCSC)KCNK15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKCNK15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KCNK15
dbVarKCNK15
ClinVarKCNK15
1000_GenomesKCNK15 
Exome Variant ServerKCNK15
ExAC (Exome Aggregation Consortium)KCNK15 (select the gene name)
Genetic variants : HAPMAP60598
Genomic Variants (DGV)KCNK15 [DGVbeta]
DECIPHERKCNK15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKCNK15 
Mutations
ICGC Data PortalKCNK15 
TCGA Data PortalKCNK15 
Broad Tumor PortalKCNK15
OASIS PortalKCNK15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKCNK15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKCNK15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KCNK15
DgiDB (Drug Gene Interaction Database)KCNK15
DoCM (Curated mutations)KCNK15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KCNK15 (select a term)
intoGenKCNK15
Cancer3DKCNK15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607368   
Orphanet
MedgenKCNK15
Genetic Testing Registry KCNK15
NextProtQ9H427 [Medical]
TSGene60598
GENETestsKCNK15
Target ValidationKCNK15
Huge Navigator KCNK15 [HugePedia]
snp3D : Map Gene to Disease60598
BioCentury BCIQKCNK15
ClinGenKCNK15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD60598
Chemical/Pharm GKB GenePA30056
Clinical trialKCNK15
Miscellaneous
canSAR (ICR)KCNK15 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNK15
EVEXKCNK15
GoPubMedKCNK15
iHOPKCNK15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:54:10 CEST 2017

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