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KCNMA1-AS1 (KCNMA1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) KCNMA1-AS1
LocusID (NCBI) 101929328
Atlas_Id 64801
Location 10q22.3  [Link to chromosome band 10q22]
Location_base_pair Starts at 76888044 and ends at 76978593 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNMA1-AS1   51213
Cards
Entrez_Gene (NCBI)KCNMA1-AS1  101929328  KCNMA1 antisense RNA 1
Aliases
GeneCards (Weizmann)KCNMA1-AS1
Ensembl hg19 (Hinxton)ENSG00000236467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236467 [Gene_View]  chr10:76888044-76978593 [Contig_View]  KCNMA1-AS1 [Vega]
ICGC DataPortalENSG00000236467
TCGA cBioPortalKCNMA1-AS1
AceView (NCBI)KCNMA1-AS1
Genatlas (Paris)KCNMA1-AS1
WikiGenes101929328
SOURCE (Princeton)KCNMA1-AS1
Genetics Home Reference (NIH)KCNMA1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)KCNMA1-AS1  -     chr10:76888044-76978593 +  10q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNMA1-AS1  -     10q22.3   [Description]    (hg19-Feb_2009)
EnsemblKCNMA1-AS1 - 10q22.3 [CytoView hg19]  KCNMA1-AS1 - 10q22.3 [CytoView hg38]
Mapping of homologs : NCBIKCNMA1-AS1 [Mapview hg19]  KCNMA1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA634403 BC030624 BX092192
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCNMA1-AS1
Cluster EST : UnigeneHs.664552 [ NCBI ]
CGAP (NCI)Hs.664552
Alternative Splicing GalleryENSG00000236467
Gene ExpressionKCNMA1-AS1 [ NCBI-GEO ]   KCNMA1-AS1 [ EBI - ARRAY_EXPRESS ]   KCNMA1-AS1 [ SEEK ]   KCNMA1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNMA1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929328
GTEX Portal (Tissue expression)KCNMA1-AS1
Human Protein AtlasENSG00000236467-KCNMA1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KCNMA1-AS1
DMDM Disease mutations101929328
Blocks (Seattle)KCNMA1-AS1
Human Protein Atlas [tissue]ENSG00000236467-KCNMA1-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000236467
BioGRIDKCNMA1-AS1
STRING (EMBL)KCNMA1-AS1
ZODIACKCNMA1-AS1
Ontologies - Pathways
Huge Navigator KCNMA1-AS1 [HugePedia]
snp3D : Map Gene to Disease101929328
BioCentury BCIQKCNMA1-AS1
ClinGenKCNMA1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929328
Clinical trialKCNMA1-AS1
Miscellaneous
canSAR (ICR)KCNMA1-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNMA1-AS1
EVEXKCNMA1-AS1
GoPubMedKCNMA1-AS1
iHOPKCNMA1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:21:46 CET 2017

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