Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNQ1-AS1 (KCNQ1 antisense RNA 1)

Identity

Alias_namesKCNQ1 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) KCNQ1-AS1
LocusID (NCBI) 338653
Atlas_Id 64805
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 2861365 and ends at 2882799 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNQ1-AS1   42790
Cards
Entrez_Gene (NCBI)KCNQ1-AS1  338653  KCNQ1 antisense RNA 1
Aliases
GeneCards (Weizmann)KCNQ1-AS1
Ensembl hg19 (Hinxton)ENSG00000229414 [Gene_View]  chr11:2861365-2882799 [Contig_View]  KCNQ1-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000229414 [Gene_View]  chr11:2861365-2882799 [Contig_View]  KCNQ1-AS1 [Vega]
ICGC DataPortalENSG00000229414
TCGA cBioPortalKCNQ1-AS1
AceView (NCBI)KCNQ1-AS1
Genatlas (Paris)KCNQ1-AS1
WikiGenes338653
SOURCE (Princeton)KCNQ1-AS1
Genetics Home Reference (NIH)KCNQ1-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)KCNQ1-AS1  -     chr11:2861365-2882799 -  11p15.4   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KCNQ1-AS1  -     11p15.4   [Description]    (hg38-Dec_2013)
EnsemblKCNQ1-AS1 - 11p15.4 [CytoView hg19]  KCNQ1-AS1 - 11p15.4 [CytoView hg38]
Mapping of homologs : NCBIKCNQ1-AS1 [Mapview hg19]  KCNQ1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ251642 HG503451
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NT_187585 NW_004929378
Consensus coding sequences : CCDS (NCBI)KCNQ1-AS1
Cluster EST : UnigeneHs.639425 [ NCBI ]
CGAP (NCI)Hs.639425
Alternative Splicing GalleryENSG00000229414
Gene ExpressionKCNQ1-AS1 [ NCBI-GEO ]   KCNQ1-AS1 [ EBI - ARRAY_EXPRESS ]   KCNQ1-AS1 [ SEEK ]   KCNQ1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNQ1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338653
GTEX Portal (Tissue expression)KCNQ1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KCNQ1-AS1
DMDM Disease mutations338653
Blocks (Seattle)KCNQ1-AS1
Human Protein AtlasENSG00000229414
Protein Interaction databases
FunCoupENSG00000229414
BioGRIDKCNQ1-AS1
STRING (EMBL)KCNQ1-AS1
ZODIACKCNQ1-AS1
Ontologies - Pathways
Huge Navigator KCNQ1-AS1 [HugePedia]
snp3D : Map Gene to Disease338653
BioCentury BCIQKCNQ1-AS1
ClinGenKCNQ1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338653
Clinical trialKCNQ1-AS1
Miscellaneous
canSAR (ICR)KCNQ1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNQ1-AS1
EVEXKCNQ1-AS1
GoPubMedKCNQ1-AS1
iHOPKCNQ1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:30 CET 2017

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