Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KCNV2 (potassium voltage-gated channel modifier subfamily V member 2)

Identity

Alias_namespotassium channel, subfamily V, member 2
potassium channel, voltage gated modifier subfamily V, member 2
Alias_symbol (synonym)Kv8.2
Other aliasKV11.1
RCD3B
HGNC (Hugo) KCNV2
LocusID (NCBI) 169522
Atlas_Id 64815
Location 9p24.2  [Link to chromosome band 9p24]
Location_base_pair Starts at 2717526 and ends at 2730037 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCNV2   19698
Cards
Entrez_Gene (NCBI)KCNV2  169522  potassium voltage-gated channel modifier subfamily V member 2
AliasesKV11.1; Kv8.2; RCD3B
GeneCards (Weizmann)KCNV2
Ensembl hg19 (Hinxton)ENSG00000168263 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168263 [Gene_View]  chr9:2717526-2730037 [Contig_View]  KCNV2 [Vega]
ICGC DataPortalENSG00000168263
TCGA cBioPortalKCNV2
AceView (NCBI)KCNV2
Genatlas (Paris)KCNV2
WikiGenes169522
SOURCE (Princeton)KCNV2
Genetics Home Reference (NIH)KCNV2
Genomic and cartography
GoldenPath hg38 (UCSC)KCNV2  -     chr9:2717526-2730037 +  9p24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCNV2  -     9p24.2   [Description]    (hg19-Feb_2009)
EnsemblKCNV2 - 9p24.2 [CytoView hg19]  KCNV2 - 9p24.2 [CytoView hg38]
Mapping of homologs : NCBIKCNV2 [Mapview hg19]  KCNV2 [Mapview hg38]
OMIM607604   610356   
Gene and transcription
Genbank (Entrez)AF348983 AK302215 BC101352 BC101353 BQ638061
RefSeq transcript (Entrez)NM_133497
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCNV2
Cluster EST : UnigeneHs.740173 [ NCBI ]
CGAP (NCI)Hs.740173
Alternative Splicing GalleryENSG00000168263
Gene ExpressionKCNV2 [ NCBI-GEO ]   KCNV2 [ EBI - ARRAY_EXPRESS ]   KCNV2 [ SEEK ]   KCNV2 [ MEM ]
Gene Expression Viewer (FireBrowse)KCNV2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)169522
GTEX Portal (Tissue expression)KCNV2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TDN2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TDN2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TDN2
Splice isoforms : SwissVarQ8TDN2
PhosPhoSitePlusQ8TDN2
Domains : Interpro (EBI)Channel_four-helix_dom    Ion_trans_dom    K_chnl_volt-dep_Kv    K_chnl_volt-dep_Kv9    SKP1/BTB/POZ    T1-type_BTB    VG_K_chnl   
Domain families : Pfam (Sanger)BTB_2 (PF02214)    Ion_trans (PF00520)   
Domain families : Pfam (NCBI)pfam02214    pfam00520   
Conserved Domain (NCBI)KCNV2
DMDM Disease mutations169522
Blocks (Seattle)KCNV2
SuperfamilyQ8TDN2
Human Protein AtlasENSG00000168263
Peptide AtlasQ8TDN2
HPRD12126
IPIIPI00152566   IPI00909571   
Protein Interaction databases
DIP (DOE-UCLA)Q8TDN2
IntAct (EBI)Q8TDN2
FunCoupENSG00000168263
BioGRIDKCNV2
STRING (EMBL)KCNV2
ZODIACKCNV2
Ontologies - Pathways
QuickGOQ8TDN2
Ontology : AmiGOvoltage-gated potassium channel activity  plasma membrane  voltage-gated potassium channel complex  integral component of membrane  regulation of ion transmembrane transport  protein homooligomerization  potassium ion transmembrane transport  
Ontology : EGO-EBIvoltage-gated potassium channel activity  plasma membrane  voltage-gated potassium channel complex  integral component of membrane  regulation of ion transmembrane transport  protein homooligomerization  potassium ion transmembrane transport  
NDEx NetworkKCNV2
Atlas of Cancer Signalling NetworkKCNV2
Wikipedia pathwaysKCNV2
Orthology - Evolution
OrthoDB169522
GeneTree (enSembl)ENSG00000168263
Phylogenetic Trees/Animal Genes : TreeFamKCNV2
HOVERGENQ8TDN2
HOGENOMQ8TDN2
Homologs : HomoloGeneKCNV2
Homology/Alignments : Family Browser (UCSC)KCNV2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKCNV2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KCNV2
dbVarKCNV2
ClinVarKCNV2
1000_GenomesKCNV2 
Exome Variant ServerKCNV2
ExAC (Exome Aggregation Consortium)KCNV2 (select the gene name)
Genetic variants : HAPMAP169522
Genomic Variants (DGV)KCNV2 [DGVbeta]
DECIPHERKCNV2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKCNV2 
Mutations
ICGC Data PortalKCNV2 
TCGA Data PortalKCNV2 
Broad Tumor PortalKCNV2
OASIS PortalKCNV2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKCNV2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKCNV2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
BioMutasearch KCNV2
DgiDB (Drug Gene Interaction Database)KCNV2
DoCM (Curated mutations)KCNV2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KCNV2 (select a term)
intoGenKCNV2
Cancer3DKCNV2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607604    610356   
Orphanet18670   
MedgenKCNV2
Genetic Testing Registry KCNV2
NextProtQ8TDN2 [Medical]
TSGene169522
GENETestsKCNV2
Target ValidationKCNV2
Huge Navigator KCNV2 [HugePedia]
snp3D : Map Gene to Disease169522
BioCentury BCIQKCNV2
ClinGenKCNV2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD169522
Chemical/Pharm GKB GenePA134992655
Clinical trialKCNV2
Miscellaneous
canSAR (ICR)KCNV2 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCNV2
EVEXKCNV2
GoPubMedKCNV2
iHOPKCNV2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:41 CEST 2017

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