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KCP (kielin/chordin-like protein)

Identity

Alias_namesCRIM2
cysteine rich BMP regulator 2 (chordin-like)
Alias_symbol (synonym)FLJ33365
NET67
Other aliasKCP1
HGNC (Hugo) KCP
LocusID (NCBI) 375616
Atlas_Id 64816
Location 7q32.1  [Link to chromosome band 7q32]
Location_base_pair Starts at 128876865 and ends at 128910719 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KCP (7q32.1) / CKLF (16q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KCP   17585
Cards
Entrez_Gene (NCBI)KCP  375616  kielin/chordin-like protein
AliasesCRIM2; KCP1; NET67
GeneCards (Weizmann)KCP
Ensembl hg19 (Hinxton)ENSG00000135253 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000135253 [Gene_View]  chr7:128876865-128910719 [Contig_View]  KCP [Vega]
ICGC DataPortalENSG00000135253
TCGA cBioPortalKCP
AceView (NCBI)KCP
Genatlas (Paris)KCP
WikiGenes375616
SOURCE (Princeton)KCP
Genetics Home Reference (NIH)KCP
Genomic and cartography
GoldenPath hg38 (UCSC)KCP  -     chr7:128876865-128910719 -  7q32.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KCP  -     7q32.1   [Description]    (hg19-Feb_2009)
EnsemblKCP - 7q32.1 [CytoView hg19]  KCP - 7q32.1 [CytoView hg38]
Mapping of homologs : NCBIKCP [Mapview hg19]  KCP [Mapview hg38]
OMIM609344   
Gene and transcription
Genbank (Entrez)AK090684 AK090715 AK095464 AK122706
RefSeq transcript (Entrez)NM_001135914 NM_199349
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KCP
Cluster EST : UnigeneHs.371746 [ NCBI ]
CGAP (NCI)Hs.371746
Alternative Splicing GalleryENSG00000135253
Gene ExpressionKCP [ NCBI-GEO ]   KCP [ EBI - ARRAY_EXPRESS ]   KCP [ SEEK ]   KCP [ MEM ]
Gene Expression Viewer (FireBrowse)KCP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)375616
GTEX Portal (Tissue expression)KCP
Human Protein AtlasENSG00000135253-KCP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZWJ8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZWJ8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZWJ8
Splice isoforms : SwissVarQ6ZWJ8
PhosPhoSitePlusQ6ZWJ8
Domaine pattern : Prosite (Expaxy)VWFC_1 (PS01208)    VWFC_2 (PS50184)    VWFD (PS51233)   
Domains : Interpro (EBI)Kcp    TIL_dom    Unchr_dom_Cys-rich    VWF_dom    VWF_type-D   
Domain families : Pfam (Sanger)VWC (PF00093)    VWD (PF00094)   
Domain families : Pfam (NCBI)pfam00093    pfam00094   
Domain families : Smart (EMBL)C8 (SM00832)  VWC (SM00214)  VWC_out (SM00215)  VWD (SM00216)  
Conserved Domain (NCBI)KCP
DMDM Disease mutations375616
Blocks (Seattle)KCP
SuperfamilyQ6ZWJ8
Human Protein Atlas [tissue]ENSG00000135253-KCP [tissue]
Peptide AtlasQ6ZWJ8
HPRD14196
IPIIPI00914663   IPI00168230   IPI00399258   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZWJ8
IntAct (EBI)Q6ZWJ8
FunCoupENSG00000135253
BioGRIDKCP
STRING (EMBL)KCP
ZODIACKCP
Ontologies - Pathways
QuickGOQ6ZWJ8
Ontology : AmiGOextracellular space  positive regulation of BMP signaling pathway  
Ontology : EGO-EBIextracellular space  positive regulation of BMP signaling pathway  
NDEx NetworkKCP
Atlas of Cancer Signalling NetworkKCP
Wikipedia pathwaysKCP
Orthology - Evolution
OrthoDB375616
GeneTree (enSembl)ENSG00000135253
Phylogenetic Trees/Animal Genes : TreeFamKCP
HOVERGENQ6ZWJ8
HOGENOMQ6ZWJ8
Homologs : HomoloGeneKCP
Homology/Alignments : Family Browser (UCSC)KCP
Gene fusions - Rearrangements
Tumor Fusion PortalKCP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKCP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KCP
dbVarKCP
ClinVarKCP
1000_GenomesKCP 
Exome Variant ServerKCP
ExAC (Exome Aggregation Consortium)ENSG00000135253
GNOMAD BrowserENSG00000135253
Genetic variants : HAPMAP375616
Genomic Variants (DGV)KCP [DGVbeta]
DECIPHERKCP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKCP 
Mutations
ICGC Data PortalKCP 
TCGA Data PortalKCP 
Broad Tumor PortalKCP
OASIS PortalKCP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKCP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KCP
DgiDB (Drug Gene Interaction Database)KCP
DoCM (Curated mutations)KCP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KCP (select a term)
intoGenKCP
Cancer3DKCP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609344   
Orphanet
DisGeNETKCP
MedgenKCP
Genetic Testing Registry KCP
NextProtQ6ZWJ8 [Medical]
TSGene375616
GENETestsKCP
Target ValidationKCP
Huge Navigator KCP [HugePedia]
snp3D : Map Gene to Disease375616
BioCentury BCIQKCP
ClinGenKCP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375616
Chemical/Pharm GKB GenePA164721151
Clinical trialKCP
Miscellaneous
canSAR (ICR)KCP (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKCP
EVEXKCP
GoPubMedKCP
iHOPKCP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:16:18 CET 2017

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