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KIAA0232 (KIAA0232)

Identity

Other alias-
HGNC (Hugo) KIAA0232
LocusID (NCBI) 9778
Atlas_Id 64852
Location 4p16.1  [Link to chromosome band 4p16]
Location_base_pair Starts at 6782732 and ends at 6884172 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIAA0232 (4p16.1) / INPP4B (4q31.21)KIAA0232 (4p16.1) / KIAA0232 (4p16.1)KIAA0232 (4p16.1) / S100P (4p16.1)
KIAA0232 (4p16.1) / SLC12A8 (3q21.2)KIAA0232 (4p16.1) / USP54 (10q22.2)TRIM38 (6p22.2) / KIAA0232 (4p16.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0232   28992
Cards
Entrez_Gene (NCBI)KIAA0232  9778  KIAA0232
Aliases
GeneCards (Weizmann)KIAA0232
Ensembl hg19 (Hinxton)ENSG00000170871 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000170871 [Gene_View]  chr4:6782732-6884172 [Contig_View]  KIAA0232 [Vega]
ICGC DataPortalENSG00000170871
TCGA cBioPortalKIAA0232
AceView (NCBI)KIAA0232
Genatlas (Paris)KIAA0232
WikiGenes9778
SOURCE (Princeton)KIAA0232
Genetics Home Reference (NIH)KIAA0232
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0232  -     chr4:6782732-6884172 +  4p16.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0232  -     4p16.1   [Description]    (hg19-Feb_2009)
EnsemblKIAA0232 - 4p16.1 [CytoView hg19]  KIAA0232 - 4p16.1 [CytoView hg38]
Mapping of homologs : NCBIKIAA0232 [Mapview hg19]  KIAA0232 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF143884 AK124715 BC150286 BU618566 CR457160
RefSeq transcript (Entrez)NM_001100590 NM_014743
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0232
Cluster EST : UnigeneHs.79276 [ NCBI ]
CGAP (NCI)Hs.79276
Alternative Splicing GalleryENSG00000170871
Gene ExpressionKIAA0232 [ NCBI-GEO ]   KIAA0232 [ EBI - ARRAY_EXPRESS ]   KIAA0232 [ SEEK ]   KIAA0232 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0232 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9778
GTEX Portal (Tissue expression)KIAA0232
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92628   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ92628  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ92628
Splice isoforms : SwissVarQ92628
PhosPhoSitePlusQ92628
Domains : Interpro (EBI)DUF4603   
Domain families : Pfam (Sanger)DUF4603 (PF15376)   
Domain families : Pfam (NCBI)pfam15376   
Conserved Domain (NCBI)KIAA0232
DMDM Disease mutations9778
Blocks (Seattle)KIAA0232
SuperfamilyQ92628
Human Protein AtlasENSG00000170871
Peptide AtlasQ92628
HPRD11070
IPIIPI00294215   IPI00383656   IPI00965177   
Protein Interaction databases
DIP (DOE-UCLA)Q92628
IntAct (EBI)Q92628
FunCoupENSG00000170871
BioGRIDKIAA0232
STRING (EMBL)KIAA0232
ZODIACKIAA0232
Ontologies - Pathways
QuickGOQ92628
Ontology : AmiGOATP binding  
Ontology : EGO-EBIATP binding  
NDEx NetworkKIAA0232
Atlas of Cancer Signalling NetworkKIAA0232
Wikipedia pathwaysKIAA0232
Orthology - Evolution
OrthoDB9778
GeneTree (enSembl)ENSG00000170871
Phylogenetic Trees/Animal Genes : TreeFamKIAA0232
HOVERGENQ92628
HOGENOMQ92628
Homologs : HomoloGeneKIAA0232
Homology/Alignments : Family Browser (UCSC)KIAA0232
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0232 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0232
dbVarKIAA0232
ClinVarKIAA0232
1000_GenomesKIAA0232 
Exome Variant ServerKIAA0232
ExAC (Exome Aggregation Consortium)KIAA0232 (select the gene name)
Genetic variants : HAPMAP9778
Genomic Variants (DGV)KIAA0232 [DGVbeta]
DECIPHERKIAA0232 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0232 
Mutations
ICGC Data PortalKIAA0232 
TCGA Data PortalKIAA0232 
Broad Tumor PortalKIAA0232
OASIS PortalKIAA0232 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0232  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0232
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0232
DgiDB (Drug Gene Interaction Database)KIAA0232
DoCM (Curated mutations)KIAA0232 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0232 (select a term)
intoGenKIAA0232
Cancer3DKIAA0232(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA0232
Genetic Testing Registry KIAA0232
NextProtQ92628 [Medical]
TSGene9778
GENETestsKIAA0232
Target ValidationKIAA0232
Huge Navigator KIAA0232 [HugePedia]
snp3D : Map Gene to Disease9778
BioCentury BCIQKIAA0232
ClinGenKIAA0232
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9778
Chemical/Pharm GKB GenePA162392816
Clinical trialKIAA0232
Miscellaneous
canSAR (ICR)KIAA0232 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0232
EVEXKIAA0232
GoPubMedKIAA0232
iHOPKIAA0232
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:46 CEST 2017

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