Atlas of Genetics and Cytogenetics in Oncology and Haematology

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Taking over the Atlas
Dear Colleagues,
The Atlas, once more, is in great danger, and I will have to proceed to a collective economic lay-off of all the team involved in the Atlas before the begining of April 2015 (a foundation having suddenly withdrawn its commitment to support the Atlas). I ask you herein if any Scientific Society (a Society of Cytogenetics, of Clinical Genetics, of Hematology, or a Cancer Society, or any other...), any University and/or Hospital, any Charity, or any database would be interested in taking over the Atlas, in whole or in part. If taking charge of the whole lot is too big, a consortium of various actors could be the solution (I am myself trying to find partners). Could you please spread the information, contact the relevant authorities, and find partners.
Survival of the Atlas will be critically dependant upon your ability to find solutions (and urgently!).
Kind regards.
Jean-Loup Huret
Donations are also welcome

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KIAA0247 (KIAA0247)


Other names-
HGNC (Hugo) KIAA0247
LocusID (NCBI) 9766
Location 14q24.1
Location_base_pair Starts at 70078310 and ends at 70181861 bp from pter ( according to hg19-Feb_2009)

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

HGNC (Hugo)KIAA0247   19956
Entrez_Gene (NCBI)KIAA0247  9766  KIAA0247
GeneCards (Weizmann)KIAA0247
Ensembl hg19 (Hinxton)ENSG00000100647 [Gene_View]  chr14:70078310-70181861 [Contig_View]  KIAA0247 [Vega]
Ensembl hg38 (Hinxton)ENSG00000100647 [Gene_View]  chr14:70078310-70181861 [Contig_View]  KIAA0247 [Vega]
ICGC DataPortalENSG00000100647
AceView (NCBI)KIAA0247
Genatlas (Paris)KIAA0247
SOURCE (Princeton)KIAA0247
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA0247  -     chr14:70078310-70181861 +  14q24.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA0247  -     14q24.1   [Description]    (hg38-Dec_2013)
EnsemblKIAA0247 - 14q24.1 [CytoView hg19]  KIAA0247 - 14q24.1 [CytoView hg38]
Mapping of homologs : NCBIKIAA0247 [Mapview hg19]  KIAA0247 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK130809 AK309302 BC064697 D87434 DC346928
RefSeq transcript (Entrez)NM_014734
RefSeq genomic (Entrez)AC_000146 NC_000014 NC_018925 NT_026437 NW_001838113 NW_004929393
Consensus coding sequences : CCDS (NCBI)KIAA0247
Cluster EST : UnigeneHs.440025 [ NCBI ]
CGAP (NCI)Hs.440025
Alternative Splicing : Fast-db (Paris)GSHG0008943
Alternative Splicing GalleryENSG00000100647
Gene ExpressionKIAA0247 [ NCBI-GEO ]     KIAA0247 [ SEEK ]   KIAA0247 [ MEM ]
SOURCE (Princeton)Expression in : [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ92537 (Uniprot)
NextProtQ92537  [Medical]
With graphics : InterProQ92537
Splice isoforms : SwissVarQ92537 (Swissvar)
Domaine pattern : Prosite (Expaxy)SUSHI (PS50923)   
Domains : Interpro (EBI)Sushi_SCR_CCP   
Related proteins : CluSTrQ92537
Domain families : Pfam (Sanger)Sushi (PF00084)   
Domain families : Pfam (NCBI)pfam00084   
Domain families : Smart (EMBL)CCP (SM00032)  
DMDM Disease mutations9766
Blocks (Seattle)Q92537
Human Protein AtlasENSG00000100647
Peptide AtlasQ92537
Protein Interaction databases
IntAct (EBI)Q92537
Ontologies - Pathways
Ontology : AmiGOmolecular_function  cellular_component  biological_process  integral component of membrane  
Ontology : EGO-EBImolecular_function  cellular_component  biological_process  integral component of membrane  
Protein Interaction DatabaseKIAA0247
DoCM (Curated mutations)KIAA0247
Wikipedia pathwaysKIAA0247
Gene fusion - rearrangements
Polymorphisms : SNP, variants
NCBI Variation ViewerKIAA0247 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0247
Exome Variant ServerKIAA0247
SNP (GeneSNP Utah)KIAA0247
SNP : HGBaseKIAA0247
Genetic variants : HAPMAPKIAA0247
Genomic Variants (DGV)KIAA0247 [DGVbeta]
ICGC Data PortalENSG00000100647 
Somatic Mutations in Cancer : COSMICKIAA0247 
CONAN: Copy Number AnalysisKIAA0247 
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] 
DECIPHER (Syndromes)14:70078310-70181861
Mutations and Diseases : HGMDKIAA0247
NextProtQ92537 [Medical]
Disease Genetic AssociationKIAA0247
Huge Navigator KIAA0247 [HugePedia]  KIAA0247 [HugeCancerGEM]
snp3D : Map Gene to Disease9766
DGIdb (Drug Gene Interaction db)KIAA0247
General knowledge
Homologs : HomoloGeneKIAA0247
Homology/Alignments : Family Browser (UCSC)KIAA0247
Phylogenetic Trees/Animal Genes : TreeFamKIAA0247
Chemical/Protein Interactions : CTD9766
Chemical/Pharm GKB GenePA128394557
Clinical trialKIAA0247
Cancer Resource (Charite)ENSG00000100647
Other databases
PubMed10 Pubmed reference(s) in Entrez
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI


Written09-2002Dessen P, Le Minor S
Updated12-2014Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Feb 14 16:26:21 CET 2015

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