Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIAA0319L (KIAA0319 like)

Identity

Alias_namesKIAA0319-like
Alias_symbol (synonym)KIAA1837
Other aliasAAVR
HGNC (Hugo) KIAA0319L
LocusID (NCBI) 79932
Atlas_Id 64854
Location 1p34.3  [Link to chromosome band 1p34]
Location_base_pair Starts at 35433490 and ends at 35557436 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CDC42 (1p36.12) / KIAA0319L (1p34.3)DST (6p12.1) / KIAA0319L (1p34.3)KIAA0319L (1p34.3) / GNAS (20q13.32)
KIAA0319L (1p34.3) / GOLGA1 (9q33.3)KIAA0319L (1p34.3) / PHC2 (1p35.1)LRRFIP1 (2q37.3) / KIAA0319L (1p34.3)
NPAS2 (2q11.2) / KIAA0319L (1p34.3)PNMA2 (8p21.2) / KIAA0319L (1p34.3)THRAP3 (1p34.3) / KIAA0319L (1p34.3)
KIAA0319L PHC2KIAA0319L GOLGA1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0319L   30071
Cards
Entrez_Gene (NCBI)KIAA0319L  79932  KIAA0319 like
AliasesAAVR
GeneCards (Weizmann)KIAA0319L
Ensembl hg19 (Hinxton)ENSG00000142687 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142687 [Gene_View]  chr1:35433490-35557436 [Contig_View]  KIAA0319L [Vega]
ICGC DataPortalENSG00000142687
TCGA cBioPortalKIAA0319L
AceView (NCBI)KIAA0319L
Genatlas (Paris)KIAA0319L
WikiGenes79932
SOURCE (Princeton)KIAA0319L
Genetics Home Reference (NIH)KIAA0319L
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0319L  -     chr1:35433490-35557436 -  1p34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0319L  -     1p34.3   [Description]    (hg19-Feb_2009)
EnsemblKIAA0319L - 1p34.3 [CytoView hg19]  KIAA0319L - 1p34.3 [CytoView hg38]
Mapping of homologs : NCBIKIAA0319L [Mapview hg19]  KIAA0319L [Mapview hg38]
OMIM613535   
Gene and transcription
Genbank (Entrez)AB058740 AF275679 AF289597 AK024287 AK090878
RefSeq transcript (Entrez)NM_024874 NM_182686
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0319L
Cluster EST : UnigeneHs.683078 [ NCBI ]
CGAP (NCI)Hs.683078
Alternative Splicing GalleryENSG00000142687
Gene ExpressionKIAA0319L [ NCBI-GEO ]   KIAA0319L [ EBI - ARRAY_EXPRESS ]   KIAA0319L [ SEEK ]   KIAA0319L [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0319L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79932
GTEX Portal (Tissue expression)KIAA0319L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IZA0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IZA0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IZA0
Splice isoforms : SwissVarQ8IZA0
PhosPhoSitePlusQ8IZA0
Domaine pattern : Prosite (Expaxy)MANSC (PS50986)    PKD (PS50093)   
Domains : Interpro (EBI)KIAA0319-like    MANSC_dom    PKD/Chitinase_dom    PKD_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)PKD (SM00089)  
Conserved Domain (NCBI)KIAA0319L
DMDM Disease mutations79932
Blocks (Seattle)KIAA0319L
PDB (SRS)2YRL   
PDB (PDBSum)2YRL   
PDB (IMB)2YRL   
PDB (RSDB)2YRL   
Structural Biology KnowledgeBase2YRL   
SCOP (Structural Classification of Proteins)2YRL   
CATH (Classification of proteins structures)2YRL   
SuperfamilyQ8IZA0
Human Protein AtlasENSG00000142687
Peptide AtlasQ8IZA0
HPRD11164
IPIIPI00472754   IPI00936149   IPI00749513   IPI00844309   IPI00514260   IPI00945695   IPI00945489   IPI00945311   IPI00946950   IPI00945498   IPI00944976   
Protein Interaction databases
DIP (DOE-UCLA)Q8IZA0
IntAct (EBI)Q8IZA0
FunCoupENSG00000142687
BioGRIDKIAA0319L
STRING (EMBL)KIAA0319L
ZODIACKIAA0319L
Ontologies - Pathways
QuickGOQ8IZA0
Ontology : AmiGOGolgi membrane  protein binding  plasma membrane  integral component of membrane  cytoplasmic vesicle  extracellular exosome  
Ontology : EGO-EBIGolgi membrane  protein binding  plasma membrane  integral component of membrane  cytoplasmic vesicle  extracellular exosome  
NDEx NetworkKIAA0319L
Atlas of Cancer Signalling NetworkKIAA0319L
Wikipedia pathwaysKIAA0319L
Orthology - Evolution
OrthoDB79932
GeneTree (enSembl)ENSG00000142687
Phylogenetic Trees/Animal Genes : TreeFamKIAA0319L
HOVERGENQ8IZA0
HOGENOMQ8IZA0
Homologs : HomoloGeneKIAA0319L
Homology/Alignments : Family Browser (UCSC)KIAA0319L
Gene fusions - Rearrangements
Fusion: TCGAKIAA0319L PHC2
Fusion: TCGAKIAA0319L GOLGA1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0319L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0319L
dbVarKIAA0319L
ClinVarKIAA0319L
1000_GenomesKIAA0319L 
Exome Variant ServerKIAA0319L
ExAC (Exome Aggregation Consortium)KIAA0319L (select the gene name)
Genetic variants : HAPMAP79932
Genomic Variants (DGV)KIAA0319L [DGVbeta]
DECIPHERKIAA0319L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0319L 
Mutations
ICGC Data PortalKIAA0319L 
TCGA Data PortalKIAA0319L 
Broad Tumor PortalKIAA0319L
OASIS PortalKIAA0319L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0319L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0319L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0319L
DgiDB (Drug Gene Interaction Database)KIAA0319L
DoCM (Curated mutations)KIAA0319L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0319L (select a term)
intoGenKIAA0319L
Cancer3DKIAA0319L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613535   
Orphanet18906   
MedgenKIAA0319L
Genetic Testing Registry KIAA0319L
NextProtQ8IZA0 [Medical]
TSGene79932
GENETestsKIAA0319L
Target ValidationKIAA0319L
Huge Navigator KIAA0319L [HugePedia]
snp3D : Map Gene to Disease79932
BioCentury BCIQKIAA0319L
ClinGenKIAA0319L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79932
Chemical/Pharm GKB GenePA142671625
Clinical trialKIAA0319L
Miscellaneous
canSAR (ICR)KIAA0319L (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0319L
EVEXKIAA0319L
GoPubMedKIAA0319L
iHOPKIAA0319L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:54:23 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.