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KIAA0391 (KIAA0391)

Identity

Alias_symbol (synonym)MRPP3
PRORP
Other alias
HGNC (Hugo) KIAA0391
LocusID (NCBI) 9692
Atlas_Id 64855
Location 14q13.2  [Link to chromosome band 14q13]
Location_base_pair Starts at 35122321 and ends at 35274078 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GTF2A1 (14q31.1) / KIAA0391 (14q13.2)KIAA0391 (14q13.2) / AKAP6 (14q12)KIAA0391 (14q13.2) / ARHGAP5 (14q12)
KIAA0391 (14q13.2) / FAM177A1 (14q13.2)MEMO1 (2p23.1) / KIAA0391 (14q13.2)PSMA6 (14q13.2) / KIAA0391 (14q13.2)
SYNE2 (14q23.2) / KIAA0391 (14q13.2)TCF7L2 (10q25.2) / KIAA0391 (14q13.2)TTC6 (14q21.1) / KIAA0391 (14q13.2)
SYNE2 KIAA0391GTF2A1 KIAA0391TTC6 KIAA0391
KIAA0391 FAM177A1KIAA0391 AKAP6

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0391   19958
Cards
Entrez_Gene (NCBI)KIAA0391  9692  KIAA0391
AliasesMRPP3; PRORP
GeneCards (Weizmann)KIAA0391
Ensembl hg19 (Hinxton)ENSG00000100890 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100890 [Gene_View]  chr14:35122321-35274078 [Contig_View]  KIAA0391 [Vega]
ICGC DataPortalENSG00000100890
TCGA cBioPortalKIAA0391
AceView (NCBI)KIAA0391
Genatlas (Paris)KIAA0391
WikiGenes9692
SOURCE (Princeton)KIAA0391
Genetics Home Reference (NIH)KIAA0391
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0391  -     chr14:35122321-35274078 +  14q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0391  -     14q13.2   [Description]    (hg19-Feb_2009)
EnsemblKIAA0391 - 14q13.2 [CytoView hg19]  KIAA0391 - 14q13.2 [CytoView hg38]
Mapping of homologs : NCBIKIAA0391 [Mapview hg19]  KIAA0391 [Mapview hg38]
OMIM609947   
Gene and transcription
Genbank (Entrez)AA838769 AB002389 AI431599 AK301931 AK303508
RefSeq transcript (Entrez)NM_001256678 NM_001256679 NM_001256680 NM_001256681 NM_014672
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0391
Cluster EST : UnigeneHs.739309 [ NCBI ]
CGAP (NCI)Hs.739309
Alternative Splicing GalleryENSG00000100890
Gene ExpressionKIAA0391 [ NCBI-GEO ]   KIAA0391 [ EBI - ARRAY_EXPRESS ]   KIAA0391 [ SEEK ]   KIAA0391 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0391 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9692
GTEX Portal (Tissue expression)KIAA0391
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15091   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15091  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15091
Splice isoforms : SwissVarO15091
PhosPhoSitePlusO15091
Domains : Interpro (EBI)MRPP3    PRORP_C   
Domain families : Pfam (Sanger)PRORP (PF16953)   
Domain families : Pfam (NCBI)pfam16953   
Conserved Domain (NCBI)KIAA0391
DMDM Disease mutations9692
Blocks (Seattle)KIAA0391
PDB (SRS)4ROU    4XGL    4XGM   
PDB (PDBSum)4ROU    4XGL    4XGM   
PDB (IMB)4ROU    4XGL    4XGM   
PDB (RSDB)4ROU    4XGL    4XGM   
Structural Biology KnowledgeBase4ROU    4XGL    4XGM   
SCOP (Structural Classification of Proteins)4ROU    4XGL    4XGM   
CATH (Classification of proteins structures)4ROU    4XGL    4XGM   
SuperfamilyO15091
Human Protein AtlasENSG00000100890
Peptide AtlasO15091
HPRD18711
IPIIPI00647491   IPI00004584   IPI00915794   IPI00915950   IPI01025282   IPI01025623   IPI01024901   IPI01024771   
Protein Interaction databases
DIP (DOE-UCLA)O15091
IntAct (EBI)O15091
FunCoupENSG00000100890
BioGRIDKIAA0391
STRING (EMBL)KIAA0391
ZODIACKIAA0391
Ontologies - Pathways
QuickGOO15091
Ontology : AmiGOtRNA 5'-leader removal  ribonuclease P activity  ribonuclease P activity  nucleus  mitochondrion  mitochondrial matrix  mitochondrial ribonuclease P complex  RNA phosphodiester bond hydrolysis, endonucleolytic  mitochondrial tRNA processing  
Ontology : EGO-EBItRNA 5'-leader removal  ribonuclease P activity  ribonuclease P activity  nucleus  mitochondrion  mitochondrial matrix  mitochondrial ribonuclease P complex  RNA phosphodiester bond hydrolysis, endonucleolytic  mitochondrial tRNA processing  
NDEx NetworkKIAA0391
Atlas of Cancer Signalling NetworkKIAA0391
Wikipedia pathwaysKIAA0391
Orthology - Evolution
OrthoDB9692
GeneTree (enSembl)ENSG00000100890
Phylogenetic Trees/Animal Genes : TreeFamKIAA0391
HOVERGENO15091
HOGENOMO15091
Homologs : HomoloGeneKIAA0391
Homology/Alignments : Family Browser (UCSC)KIAA0391
Gene fusions - Rearrangements
Fusion: TCGASYNE2 KIAA0391
Fusion: TCGAGTF2A1 KIAA0391
Fusion: TCGATTC6 KIAA0391
Fusion: TCGAKIAA0391 FAM177A1
Fusion: TCGAKIAA0391 AKAP6
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0391 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0391
dbVarKIAA0391
ClinVarKIAA0391
1000_GenomesKIAA0391 
Exome Variant ServerKIAA0391
ExAC (Exome Aggregation Consortium)KIAA0391 (select the gene name)
Genetic variants : HAPMAP9692
Genomic Variants (DGV)KIAA0391 [DGVbeta]
DECIPHERKIAA0391 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0391 
Mutations
ICGC Data PortalKIAA0391 
TCGA Data PortalKIAA0391 
Broad Tumor PortalKIAA0391
OASIS PortalKIAA0391 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0391  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0391
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0391
DgiDB (Drug Gene Interaction Database)KIAA0391
DoCM (Curated mutations)KIAA0391 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0391 (select a term)
intoGenKIAA0391
Cancer3DKIAA0391(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609947   
Orphanet
MedgenKIAA0391
Genetic Testing Registry KIAA0391
NextProtO15091 [Medical]
TSGene9692
GENETestsKIAA0391
Target ValidationKIAA0391
Huge Navigator KIAA0391 [HugePedia]
snp3D : Map Gene to Disease9692
BioCentury BCIQKIAA0391
ClinGenKIAA0391
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9692
Chemical/Pharm GKB GenePA134879499
Clinical trialKIAA0391
Miscellaneous
canSAR (ICR)KIAA0391 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0391
EVEXKIAA0391
GoPubMedKIAA0391
iHOPKIAA0391
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:54:23 CEST 2017

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