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KIAA0408 (KIAA0408)

Identity

Other alias-
HGNC (Hugo) KIAA0408
LocusID (NCBI) 9729
Atlas_Id 64856
Location 6q22.33  [Link to chromosome band 6q22]
Location_base_pair Starts at 127438406 and ends at 127459390 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KIAA0408 (6q22.33) / KIAA0408 (6q22.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0408   21636
Cards
Entrez_Gene (NCBI)KIAA0408  9729  KIAA0408
Aliases
GeneCards (Weizmann)KIAA0408
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:127438406-127459390 [Contig_View]  KIAA0408 [Vega]
TCGA cBioPortalKIAA0408
AceView (NCBI)KIAA0408
Genatlas (Paris)KIAA0408
WikiGenes9729
SOURCE (Princeton)KIAA0408
Genetics Home Reference (NIH)KIAA0408
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0408  -     chr6:127438406-127459390 -  6q22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0408  -     6q22.33   [Description]    (hg19-Feb_2009)
EnsemblKIAA0408 - 6q22.33 [CytoView hg19]  KIAA0408 - 6q22.33 [CytoView hg38]
Mapping of homologs : NCBIKIAA0408 [Mapview hg19]  KIAA0408 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB007868 AK091424 AK125983 AK127114 AL596809
RefSeq transcript (Entrez)NM_014702
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0408
Cluster EST : UnigeneHs.319247 [ NCBI ]
CGAP (NCI)Hs.319247
Gene ExpressionKIAA0408 [ NCBI-GEO ]   KIAA0408 [ EBI - ARRAY_EXPRESS ]   KIAA0408 [ SEEK ]   KIAA0408 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0408 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9729
GTEX Portal (Tissue expression)KIAA0408
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZU52   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZU52  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZU52
Splice isoforms : SwissVarQ6ZU52
PhosPhoSitePlusQ6ZU52
Domains : Interpro (EBI)DUF4482   
Domain families : Pfam (Sanger)DUF4482 (PF14818)   
Domain families : Pfam (NCBI)pfam14818   
Conserved Domain (NCBI)KIAA0408
DMDM Disease mutations9729
Blocks (Seattle)KIAA0408
SuperfamilyQ6ZU52
Peptide AtlasQ6ZU52
HPRD17187
IPIIPI00006011   IPI00553104   IPI00978977   IPI00980340   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZU52
IntAct (EBI)Q6ZU52
BioGRIDKIAA0408
STRING (EMBL)KIAA0408
ZODIACKIAA0408
Ontologies - Pathways
QuickGOQ6ZU52
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkKIAA0408
Atlas of Cancer Signalling NetworkKIAA0408
Wikipedia pathwaysKIAA0408
Orthology - Evolution
OrthoDB9729
Phylogenetic Trees/Animal Genes : TreeFamKIAA0408
HOVERGENQ6ZU52
HOGENOMQ6ZU52
Homologs : HomoloGeneKIAA0408
Homology/Alignments : Family Browser (UCSC)KIAA0408
Gene fusions - Rearrangements
Fusion : QuiverKIAA0408
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0408 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0408
dbVarKIAA0408
ClinVarKIAA0408
1000_GenomesKIAA0408 
Exome Variant ServerKIAA0408
Varsome BrowserKIAA0408
Genetic variants : HAPMAP9729
Genomic Variants (DGV)KIAA0408 [DGVbeta]
DECIPHERKIAA0408 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0408 
Mutations
ICGC Data PortalKIAA0408 
TCGA Data PortalKIAA0408 
Broad Tumor PortalKIAA0408
OASIS PortalKIAA0408 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0408  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0408
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0408
DgiDB (Drug Gene Interaction Database)KIAA0408
DoCM (Curated mutations)KIAA0408 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0408 (select a term)
intoGenKIAA0408
Cancer3DKIAA0408(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETKIAA0408
MedgenKIAA0408
Genetic Testing Registry KIAA0408
NextProtQ6ZU52 [Medical]
TSGene9729
GENETestsKIAA0408
Target ValidationKIAA0408
Huge Navigator KIAA0408 [HugePedia]
snp3D : Map Gene to Disease9729
BioCentury BCIQKIAA0408
ClinGenKIAA0408
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9729
Chemical/Pharm GKB GenePA134883396
Clinical trialKIAA0408
Miscellaneous
canSAR (ICR)KIAA0408 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0408
EVEXKIAA0408
GoPubMedKIAA0408
iHOPKIAA0408
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 13:50:49 CEST 2018

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