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KIAA0586 (KIAA0586)

Identity

Alias_symbol (synonym)Talpid3
JBTS23
Other aliasSRTD14
HGNC (Hugo) KIAA0586
LocusID (NCBI) 9786
Atlas_Id 64860
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 58427385 and ends at 58548831 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
C14orf37 (14q23.1) / KIAA0586 (14q23.1)KIAA0586 (14q23.1) / MPP5 (14q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0586   19960
LRG (Locus Reference Genomic)LRG_1096
Cards
Entrez_Gene (NCBI)KIAA0586  9786  KIAA0586
AliasesJBTS23; SRTD14; Talpid3
GeneCards (Weizmann)KIAA0586
Ensembl hg19 (Hinxton)ENSG00000100578 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100578 [Gene_View]  chr14:58427385-58548831 [Contig_View]  KIAA0586 [Vega]
ICGC DataPortalENSG00000100578
TCGA cBioPortalKIAA0586
AceView (NCBI)KIAA0586
Genatlas (Paris)KIAA0586
WikiGenes9786
SOURCE (Princeton)KIAA0586
Genetics Home Reference (NIH)KIAA0586
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0586  -     chr14:58427385-58548831 +  14q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0586  -     14q23.1   [Description]    (hg19-Feb_2009)
EnsemblKIAA0586 - 14q23.1 [CytoView hg19]  KIAA0586 - 14q23.1 [CytoView hg38]
Mapping of homologs : NCBIKIAA0586 [Mapview hg19]  KIAA0586 [Mapview hg38]
OMIM610178   616490   616546   
Gene and transcription
Genbank (Entrez)AB011158 AI223212 AI378482 AK126155 AK302579
RefSeq transcript (Entrez)NM_001244189 NM_001244190 NM_001244191 NM_001244192 NM_001244193 NM_001329943 NM_001329944 NM_001329945 NM_001329946 NM_001329947 NM_014749
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0586
Cluster EST : UnigeneHs.232532 [ NCBI ]
CGAP (NCI)Hs.232532
Alternative Splicing GalleryENSG00000100578
Gene ExpressionKIAA0586 [ NCBI-GEO ]   KIAA0586 [ EBI - ARRAY_EXPRESS ]   KIAA0586 [ SEEK ]   KIAA0586 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0586 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9786
GTEX Portal (Tissue expression)KIAA0586
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BVV6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BVV6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BVV6
Splice isoforms : SwissVarQ9BVV6
PhosPhoSitePlusQ9BVV6
Domains : Interpro (EBI)TALPID3   
Domain families : Pfam (Sanger)TALPID3 (PF15324)   
Domain families : Pfam (NCBI)pfam15324   
Conserved Domain (NCBI)KIAA0586
DMDM Disease mutations9786
Blocks (Seattle)KIAA0586
SuperfamilyQ9BVV6
Human Protein AtlasENSG00000100578
Peptide AtlasQ9BVV6
HPRD11092
IPIIPI01025575   IPI00941339   IPI00413612   IPI01010584   IPI00006096   IPI01025853   IPI01025527   IPI01025627   IPI01025038   
Protein Interaction databases
DIP (DOE-UCLA)Q9BVV6
IntAct (EBI)Q9BVV6
FunCoupENSG00000100578
BioGRIDKIAA0586
STRING (EMBL)KIAA0586
ZODIACKIAA0586
Ontologies - Pathways
QuickGOQ9BVV6
Ontology : AmiGOphotoreceptor inner segment  centrosome  centriole  smoothened signaling pathway  smoothened signaling pathway  ciliary basal body  cilium assembly  cilium assembly  regulation of establishment of protein localization  
Ontology : EGO-EBIphotoreceptor inner segment  centrosome  centriole  smoothened signaling pathway  smoothened signaling pathway  ciliary basal body  cilium assembly  cilium assembly  regulation of establishment of protein localization  
NDEx NetworkKIAA0586
Atlas of Cancer Signalling NetworkKIAA0586
Wikipedia pathwaysKIAA0586
Orthology - Evolution
OrthoDB9786
GeneTree (enSembl)ENSG00000100578
Phylogenetic Trees/Animal Genes : TreeFamKIAA0586
HOVERGENQ9BVV6
HOGENOMQ9BVV6
Homologs : HomoloGeneKIAA0586
Homology/Alignments : Family Browser (UCSC)KIAA0586
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0586 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0586
dbVarKIAA0586
ClinVarKIAA0586
1000_GenomesKIAA0586 
Exome Variant ServerKIAA0586
ExAC (Exome Aggregation Consortium)KIAA0586 (select the gene name)
Genetic variants : HAPMAP9786
Genomic Variants (DGV)KIAA0586 [DGVbeta]
DECIPHERKIAA0586 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0586 
Mutations
ICGC Data PortalKIAA0586 
TCGA Data PortalKIAA0586 
Broad Tumor PortalKIAA0586
OASIS PortalKIAA0586 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0586  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0586
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0586
DgiDB (Drug Gene Interaction Database)KIAA0586
DoCM (Curated mutations)KIAA0586 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0586 (select a term)
intoGenKIAA0586
Cancer3DKIAA0586(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610178    616490    616546   
Orphanet1022    22695   
MedgenKIAA0586
Genetic Testing Registry KIAA0586
NextProtQ9BVV6 [Medical]
TSGene9786
GENETestsKIAA0586
Target ValidationKIAA0586
Huge Navigator KIAA0586 [HugePedia]
snp3D : Map Gene to Disease9786
BioCentury BCIQKIAA0586
ClinGenKIAA0586
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9786
Chemical/Pharm GKB GenePA134992213
Clinical trialKIAA0586
Miscellaneous
canSAR (ICR)KIAA0586 (select the gene name)
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0586
EVEXKIAA0586
GoPubMedKIAA0586
iHOPKIAA0586
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:48 CEST 2017

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