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KIAA0825 (KIAA0825)

Identity

Alias_namesC5orf36
chromosome 5 open reading frame 36
Alias_symbol (synonym)DKFZp686F0372
MGC34713
Other alias
HGNC (Hugo) KIAA0825
LocusID (NCBI) 285600
Atlas_Id 64863
Location 5q15  [Link to chromosome band 5q15]
Location_base_pair Starts at 93486556 and ends at 93954309 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FAM172A (5q15) / KIAA0825 (5q15)GCN1 (12q24.23) / KIAA0825 (5q15)IPO11 (5q12.1) / KIAA0825 (5q15)
KIAA0825 (5q15) / HSPH1 (13q12.3)KIAA0825 (5q15) / MCTP1 (5q15)MFN2 (1p36.22) / KIAA0825 (5q15)
PGGT1B (5q22.3) / KIAA0825 (5q15)RNPC3 (1p21.1) / KIAA0825 (5q15)KIAA0825 HSPH1
KIAA0825 MCTP1PGGT1B KIAA0825RNPC3 KIAA0825

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0825   28532
Cards
Entrez_Gene (NCBI)KIAA0825  285600  KIAA0825
AliasesC5orf36
GeneCards (Weizmann)KIAA0825
Ensembl hg19 (Hinxton)ENSG00000185261 [Gene_View]  chr5:93486556-93954309 [Contig_View]  KIAA0825 [Vega]
Ensembl hg38 (Hinxton)ENSG00000185261 [Gene_View]  chr5:93486556-93954309 [Contig_View]  KIAA0825 [Vega]
ICGC DataPortalENSG00000185261
TCGA cBioPortalKIAA0825
AceView (NCBI)KIAA0825
Genatlas (Paris)KIAA0825
WikiGenes285600
SOURCE (Princeton)KIAA0825
Genetics Home Reference (NIH)KIAA0825
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA0825  -     chr5:93486556-93954309 -  5q15   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA0825  -     5q15   [Description]    (hg38-Dec_2013)
EnsemblKIAA0825 - 5q15 [CytoView hg19]  KIAA0825 - 5q15 [CytoView hg38]
Mapping of homologs : NCBIKIAA0825 [Mapview hg19]  KIAA0825 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB020632 AK130941 AK308195 BC035515 BX648338
RefSeq transcript (Entrez)NM_001145678 NM_173665
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)KIAA0825
Cluster EST : UnigeneHs.425123 [ NCBI ]
CGAP (NCI)Hs.425123
Alternative Splicing GalleryENSG00000185261
Gene ExpressionKIAA0825 [ NCBI-GEO ]   KIAA0825 [ EBI - ARRAY_EXPRESS ]   KIAA0825 [ SEEK ]   KIAA0825 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0825 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285600
GTEX Portal (Tissue expression)KIAA0825
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IV33   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IV33  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IV33
Splice isoforms : SwissVarQ8IV33
PhosPhoSitePlusQ8IV33
Domains : Interpro (EBI)DUF4495   
Domain families : Pfam (Sanger)DUF4495 (PF14906)   
Domain families : Pfam (NCBI)pfam14906   
Conserved Domain (NCBI)KIAA0825
DMDM Disease mutations285600
Blocks (Seattle)KIAA0825
SuperfamilyQ8IV33
Human Protein AtlasENSG00000185261
Peptide AtlasQ8IV33
HPRD11337
IPIIPI00967381   IPI00216850   IPI00401101   
Protein Interaction databases
DIP (DOE-UCLA)Q8IV33
IntAct (EBI)Q8IV33
FunCoupENSG00000185261
BioGRIDKIAA0825
STRING (EMBL)KIAA0825
ZODIACKIAA0825
Ontologies - Pathways
QuickGOQ8IV33
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA0825
Atlas of Cancer Signalling NetworkKIAA0825
Wikipedia pathwaysKIAA0825
Orthology - Evolution
OrthoDB285600
GeneTree (enSembl)ENSG00000185261
Phylogenetic Trees/Animal Genes : TreeFamKIAA0825
HOVERGENQ8IV33
HOGENOMQ8IV33
Homologs : HomoloGeneKIAA0825
Homology/Alignments : Family Browser (UCSC)KIAA0825
Gene fusions - Rearrangements
Fusion: TCGAKIAA0825 HSPH1
Fusion: TCGAKIAA0825 MCTP1
Fusion: TCGAPGGT1B KIAA0825
Fusion: TCGARNPC3 KIAA0825
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0825 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0825
dbVarKIAA0825
ClinVarKIAA0825
1000_GenomesKIAA0825 
Exome Variant ServerKIAA0825
ExAC (Exome Aggregation Consortium)KIAA0825 (select the gene name)
Genetic variants : HAPMAP285600
Genomic Variants (DGV)KIAA0825 [DGVbeta]
DECIPHER (Syndromes)5:93486556-93954309  ENSG00000185261
CONAN: Copy Number AnalysisKIAA0825 
Mutations
ICGC Data PortalKIAA0825 
TCGA Data PortalKIAA0825 
Broad Tumor PortalKIAA0825
OASIS PortalKIAA0825 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0825  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0825
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0825
DgiDB (Drug Gene Interaction Database)KIAA0825
DoCM (Curated mutations)KIAA0825 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0825 (select a term)
intoGenKIAA0825
Cancer3DKIAA0825(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA0825
Genetic Testing Registry KIAA0825
NextProtQ8IV33 [Medical]
TSGene285600
GENETestsKIAA0825
Huge Navigator KIAA0825 [HugePedia]
snp3D : Map Gene to Disease285600
BioCentury BCIQKIAA0825
ClinGenKIAA0825
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285600
Chemical/Pharm GKB GenePA162380116
Clinical trialKIAA0825
Miscellaneous
canSAR (ICR)KIAA0825 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0825
EVEXKIAA0825
GoPubMedKIAA0825
iHOPKIAA0825
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:42 CET 2017

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