Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KIAA0907 (KIAA0907)

Identity

Alias_symbol (synonym)BLOM7
Other aliasSNORA80EHG
HGNC (Hugo) KIAA0907
LocusID (NCBI) 22889
Atlas_Id 64866
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 155913043 and ends at 155934442 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CRTC2 (1q21.3) / KIAA0907 (1q22)KIAA0907 (1q22) / KIAA0907 (1q22)KIAA0907 (1q22) / MBP (18q23)
KRAS (12p12.1) / KIAA0907 (1q22)ZC3H3 (8q24.3) / KIAA0907 (1q22)CRTC2 KIAA0907
ZC3H3 KIAA0907

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0907   29145
Cards
Entrez_Gene (NCBI)KIAA0907  22889  KIAA0907
AliasesBLOM7; SNORA80EHG
GeneCards (Weizmann)KIAA0907
Ensembl hg19 (Hinxton)ENSG00000132680 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132680 [Gene_View]  chr1:155913043-155934442 [Contig_View]  KIAA0907 [Vega]
ICGC DataPortalENSG00000132680
TCGA cBioPortalKIAA0907
AceView (NCBI)KIAA0907
Genatlas (Paris)KIAA0907
WikiGenes22889
SOURCE (Princeton)KIAA0907
Genetics Home Reference (NIH)KIAA0907
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0907  -     chr1:155913043-155934442 -  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0907  -     1q22   [Description]    (hg19-Feb_2009)
EnsemblKIAA0907 - 1q22 [CytoView hg19]  KIAA0907 - 1q22 [CytoView hg38]
Mapping of homologs : NCBIKIAA0907 [Mapview hg19]  KIAA0907 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB020714 AK225714 AK289902 AW206574 AY112680
RefSeq transcript (Entrez)NM_014949
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0907
Cluster EST : UnigeneHs.24656 [ NCBI ]
CGAP (NCI)Hs.24656
Alternative Splicing GalleryENSG00000132680
Gene ExpressionKIAA0907 [ NCBI-GEO ]   KIAA0907 [ EBI - ARRAY_EXPRESS ]   KIAA0907 [ SEEK ]   KIAA0907 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0907 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22889
GTEX Portal (Tissue expression)KIAA0907
Human Protein AtlasENSG00000132680-KIAA0907 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z7F0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z7F0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z7F0
Splice isoforms : SwissVarQ7Z7F0
PhosPhoSitePlusQ7Z7F0
Domains : Interpro (EBI)KH_dom_type_1    KH_prot   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KIAA0907
DMDM Disease mutations22889
Blocks (Seattle)KIAA0907
PDB (SRS)2YQR   
PDB (PDBSum)2YQR   
PDB (IMB)2YQR   
PDB (RSDB)2YQR   
Structural Biology KnowledgeBase2YQR   
SCOP (Structural Classification of Proteins)2YQR   
CATH (Classification of proteins structures)2YQR   
SuperfamilyQ7Z7F0
Human Protein Atlas [tissue]ENSG00000132680-KIAA0907 [tissue]
Peptide AtlasQ7Z7F0
HPRD17198
IPIIPI00401900   IPI00640905   IPI00385543   IPI00854688   IPI00955999   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z7F0
IntAct (EBI)Q7Z7F0
FunCoupENSG00000132680
BioGRIDKIAA0907
STRING (EMBL)KIAA0907
ZODIACKIAA0907
Ontologies - Pathways
QuickGOQ7Z7F0
Ontology : AmiGORNA binding  protein binding  nucleus  
Ontology : EGO-EBIRNA binding  protein binding  nucleus  
NDEx NetworkKIAA0907
Atlas of Cancer Signalling NetworkKIAA0907
Wikipedia pathwaysKIAA0907
Orthology - Evolution
OrthoDB22889
GeneTree (enSembl)ENSG00000132680
Phylogenetic Trees/Animal Genes : TreeFamKIAA0907
HOVERGENQ7Z7F0
HOGENOMQ7Z7F0
Homologs : HomoloGeneKIAA0907
Homology/Alignments : Family Browser (UCSC)KIAA0907
Gene fusions - Rearrangements
Fusion: TCGA_MDACCCRTC2 KIAA0907
Fusion: TCGA_MDACCZC3H3 KIAA0907
Tumor Fusion PortalKIAA0907
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0907 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0907
dbVarKIAA0907
ClinVarKIAA0907
1000_GenomesKIAA0907 
Exome Variant ServerKIAA0907
ExAC (Exome Aggregation Consortium)ENSG00000132680
GNOMAD BrowserENSG00000132680
Genetic variants : HAPMAP22889
Genomic Variants (DGV)KIAA0907 [DGVbeta]
DECIPHERKIAA0907 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0907 
Mutations
ICGC Data PortalKIAA0907 
TCGA Data PortalKIAA0907 
Broad Tumor PortalKIAA0907
OASIS PortalKIAA0907 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0907  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0907
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0907
DgiDB (Drug Gene Interaction Database)KIAA0907
DoCM (Curated mutations)KIAA0907 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0907 (select a term)
intoGenKIAA0907
Cancer3DKIAA0907(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETKIAA0907
MedgenKIAA0907
Genetic Testing Registry KIAA0907
NextProtQ7Z7F0 [Medical]
TSGene22889
GENETestsKIAA0907
Target ValidationKIAA0907
Huge Navigator KIAA0907 [HugePedia]
snp3D : Map Gene to Disease22889
BioCentury BCIQKIAA0907
ClinGenKIAA0907
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22889
Chemical/Pharm GKB GenePA142671618
Clinical trialKIAA0907
Miscellaneous
canSAR (ICR)KIAA0907 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0907
EVEXKIAA0907
GoPubMedKIAA0907
iHOPKIAA0907
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:46:00 CET 2017

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