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KIAA0930 (KIAA0930)

Identity

Alias_namesC22orf9
chromosome 22 open reading frame 9
Alias_symbol (synonym)bK268H5.C22.1
Other aliasLSC3
HGNC (Hugo) KIAA0930
LocusID (NCBI) 23313
Atlas_Id 64867
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 45192242 and ends at 45240769 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIAA0930 (22q13.31) / ANK3 (10q21.2)KIAA0930 (22q13.31) / KIAA0930 (22q13.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA0930   1314
Cards
Entrez_Gene (NCBI)KIAA0930  23313  KIAA0930
AliasesC22orf9; LSC3
GeneCards (Weizmann)KIAA0930
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr22:45192242-45240769 [Contig_View]  KIAA0930 [Vega]
TCGA cBioPortalKIAA0930
AceView (NCBI)KIAA0930
Genatlas (Paris)KIAA0930
WikiGenes23313
SOURCE (Princeton)KIAA0930
Genetics Home Reference (NIH)KIAA0930
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA0930  -     chr22:45192242-45240769 -  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA0930  -     22q13.31   [Description]    (hg19-Feb_2009)
EnsemblKIAA0930 - 22q13.31 [CytoView hg19]  KIAA0930 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBIKIAA0930 [Mapview hg19]  KIAA0930 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB023147 AI830875 AK025608 AK094359 AK094937
RefSeq transcript (Entrez)NM_001009880 NM_015264
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA0930
Cluster EST : UnigeneHs.592207 [ NCBI ]
CGAP (NCI)Hs.592207
Gene ExpressionKIAA0930 [ NCBI-GEO ]   KIAA0930 [ EBI - ARRAY_EXPRESS ]   KIAA0930 [ SEEK ]   KIAA0930 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA0930 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23313
GTEX Portal (Tissue expression)KIAA0930
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ICG6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ICG6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ICG6
Splice isoforms : SwissVarQ6ICG6
PhosPhoSitePlusQ6ICG6
Domains : Interpro (EBI)DUF2045   
Domain families : Pfam (Sanger)DUF2045 (PF09741)   
Domain families : Pfam (NCBI)pfam09741   
Conserved Domain (NCBI)KIAA0930
DMDM Disease mutations23313
Blocks (Seattle)KIAA0930
SuperfamilyQ6ICG6
Peptide AtlasQ6ICG6
HPRD12802
IPIIPI00216917   IPI00549947   IPI00791563   IPI01026445   IPI00889780   IPI00892980   IPI00892622   IPI00892666   IPI00894347   
Protein Interaction databases
DIP (DOE-UCLA)Q6ICG6
IntAct (EBI)Q6ICG6
BioGRIDKIAA0930
STRING (EMBL)KIAA0930
ZODIACKIAA0930
Ontologies - Pathways
QuickGOQ6ICG6
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA0930
Atlas of Cancer Signalling NetworkKIAA0930
Wikipedia pathwaysKIAA0930
Orthology - Evolution
OrthoDB23313
Phylogenetic Trees/Animal Genes : TreeFamKIAA0930
HOVERGENQ6ICG6
HOGENOMQ6ICG6
Homologs : HomoloGeneKIAA0930
Homology/Alignments : Family Browser (UCSC)KIAA0930
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA0930 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA0930
dbVarKIAA0930
ClinVarKIAA0930
1000_GenomesKIAA0930 
Exome Variant ServerKIAA0930
ExAC (Exome Aggregation Consortium)KIAA0930 (select the gene name)
Genetic variants : HAPMAP23313
Genomic Variants (DGV)KIAA0930 [DGVbeta]
DECIPHERKIAA0930 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA0930 
Mutations
ICGC Data PortalKIAA0930 
TCGA Data PortalKIAA0930 
Broad Tumor PortalKIAA0930
OASIS PortalKIAA0930 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA0930  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA0930
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA0930
DgiDB (Drug Gene Interaction Database)KIAA0930
DoCM (Curated mutations)KIAA0930 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA0930 (select a term)
intoGenKIAA0930
Cancer3DKIAA0930(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA0930
Genetic Testing Registry KIAA0930
NextProtQ6ICG6 [Medical]
TSGene23313
GENETestsKIAA0930
Target ValidationKIAA0930
Huge Navigator KIAA0930 [HugePedia]
snp3D : Map Gene to Disease23313
BioCentury BCIQKIAA0930
ClinGenKIAA0930
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23313
Chemical/Pharm GKB GenePA128394623
Clinical trialKIAA0930
Miscellaneous
canSAR (ICR)KIAA0930 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA0930
EVEXKIAA0930
GoPubMedKIAA0930
iHOPKIAA0930
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:54:26 CEST 2017

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