Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KIAA1143 (KIAA1143)

Identity

Other alias-
HGNC (Hugo) KIAA1143
LocusID (NCBI) 57456
Atlas_Id 64873
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 44748744 and ends at 44761681 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1143   29198
Cards
Entrez_Gene (NCBI)KIAA1143  57456  KIAA1143
Aliases
GeneCards (Weizmann)KIAA1143
Ensembl hg19 (Hinxton)ENSG00000163807 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163807 [Gene_View]  chr3:44748744-44761681 [Contig_View]  KIAA1143 [Vega]
ICGC DataPortalENSG00000163807
TCGA cBioPortalKIAA1143
AceView (NCBI)KIAA1143
Genatlas (Paris)KIAA1143
WikiGenes57456
SOURCE (Princeton)KIAA1143
Genetics Home Reference (NIH)KIAA1143
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1143  -     chr3:44748744-44761681 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1143  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblKIAA1143 - 3p21.31 [CytoView hg19]  KIAA1143 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIKIAA1143 [Mapview hg19]  KIAA1143 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB032969 AK289549 BC008468 BC016790 BC070360
RefSeq transcript (Entrez)NM_001320334 NM_020696
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1143
Cluster EST : UnigeneHs.744955 [ NCBI ]
CGAP (NCI)Hs.744955
Alternative Splicing GalleryENSG00000163807
Gene ExpressionKIAA1143 [ NCBI-GEO ]   KIAA1143 [ EBI - ARRAY_EXPRESS ]   KIAA1143 [ SEEK ]   KIAA1143 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1143 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57456
GTEX Portal (Tissue expression)KIAA1143
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96AT1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96AT1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96AT1
Splice isoforms : SwissVarQ96AT1
PhosPhoSitePlusQ96AT1
Domains : Interpro (EBI)DUF4604   
Domain families : Pfam (Sanger)DUF4604 (PF15377)   
Domain families : Pfam (NCBI)pfam15377   
Conserved Domain (NCBI)KIAA1143
DMDM Disease mutations57456
Blocks (Seattle)KIAA1143
SuperfamilyQ96AT1
Human Protein AtlasENSG00000163807
Peptide AtlasQ96AT1
HPRD13833
IPIIPI00410618   
Protein Interaction databases
DIP (DOE-UCLA)Q96AT1
IntAct (EBI)Q96AT1
FunCoupENSG00000163807
BioGRIDKIAA1143
STRING (EMBL)KIAA1143
ZODIACKIAA1143
Ontologies - Pathways
QuickGOQ96AT1
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkKIAA1143
Atlas of Cancer Signalling NetworkKIAA1143
Wikipedia pathwaysKIAA1143
Orthology - Evolution
OrthoDB57456
GeneTree (enSembl)ENSG00000163807
Phylogenetic Trees/Animal Genes : TreeFamKIAA1143
HOVERGENQ96AT1
HOGENOMQ96AT1
Homologs : HomoloGeneKIAA1143
Homology/Alignments : Family Browser (UCSC)KIAA1143
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1143 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1143
dbVarKIAA1143
ClinVarKIAA1143
1000_GenomesKIAA1143 
Exome Variant ServerKIAA1143
ExAC (Exome Aggregation Consortium)KIAA1143 (select the gene name)
Genetic variants : HAPMAP57456
Genomic Variants (DGV)KIAA1143 [DGVbeta]
DECIPHERKIAA1143 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1143 
Mutations
ICGC Data PortalKIAA1143 
TCGA Data PortalKIAA1143 
Broad Tumor PortalKIAA1143
OASIS PortalKIAA1143 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1143  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1143
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1143
DgiDB (Drug Gene Interaction Database)KIAA1143
DoCM (Curated mutations)KIAA1143 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1143 (select a term)
intoGenKIAA1143
Cancer3DKIAA1143(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1143
Genetic Testing Registry KIAA1143
NextProtQ96AT1 [Medical]
TSGene57456
GENETestsKIAA1143
Target ValidationKIAA1143
Huge Navigator KIAA1143 [HugePedia]
snp3D : Map Gene to Disease57456
BioCentury BCIQKIAA1143
ClinGenKIAA1143
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57456
Chemical/Pharm GKB GenePA142671622
Clinical trialKIAA1143
Miscellaneous
canSAR (ICR)KIAA1143 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1143
EVEXKIAA1143
GoPubMedKIAA1143
iHOPKIAA1143
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:11:49 CEST 2017

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