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KIAA1328 (KIAA1328)

Identity

Other alias-
HGNC (Hugo) KIAA1328
LocusID (NCBI) 57536
Atlas_Id 64882
Location 18q12.2  [Link to chromosome band 18q12]
Location_base_pair Starts at 36829106 and ends at 37225334 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BBS5 (2q31.1) / KIAA1328 (18q12.2)CDH2 (18q12.1) / KIAA1328 (18q12.2)KIAA1328 (18q12.2) / DCC (18q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1328   29248
Cards
Entrez_Gene (NCBI)KIAA1328  57536  KIAA1328
Aliases
GeneCards (Weizmann)KIAA1328
Ensembl hg19 (Hinxton)ENSG00000150477 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150477 [Gene_View]  chr18:36829106-37225334 [Contig_View]  KIAA1328 [Vega]
ICGC DataPortalENSG00000150477
TCGA cBioPortalKIAA1328
AceView (NCBI)KIAA1328
Genatlas (Paris)KIAA1328
WikiGenes57536
SOURCE (Princeton)KIAA1328
Genetics Home Reference (NIH)KIAA1328
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1328  -     chr18:36829106-37225334 +  18q12.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1328  -     18q12.2   [Description]    (hg19-Feb_2009)
EnsemblKIAA1328 - 18q12.2 [CytoView hg19]  KIAA1328 - 18q12.2 [CytoView hg38]
Mapping of homologs : NCBIKIAA1328 [Mapview hg19]  KIAA1328 [Mapview hg38]
OMIM616480   
Gene and transcription
Genbank (Entrez)AB037749 AK130479 AK292288 AK304230 AL832625
RefSeq transcript (Entrez)NM_001322327 NM_020776
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1328
Cluster EST : UnigeneHs.586976 [ NCBI ]
CGAP (NCI)Hs.586976
Alternative Splicing GalleryENSG00000150477
Gene ExpressionKIAA1328 [ NCBI-GEO ]   KIAA1328 [ EBI - ARRAY_EXPRESS ]   KIAA1328 [ SEEK ]   KIAA1328 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1328 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57536
GTEX Portal (Tissue expression)KIAA1328
Human Protein AtlasENSG00000150477-KIAA1328 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86T90   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86T90  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86T90
Splice isoforms : SwissVarQ86T90
PhosPhoSitePlusQ86T90
Domains : Interpro (EBI)Hinderin   
Domain families : Pfam (Sanger)KIAA1328 (PF15369)   
Domain families : Pfam (NCBI)pfam15369   
Conserved Domain (NCBI)KIAA1328
DMDM Disease mutations57536
Blocks (Seattle)KIAA1328
SuperfamilyQ86T90
Human Protein Atlas [tissue]ENSG00000150477-KIAA1328 [tissue]
Peptide AtlasQ86T90
HPRD17211
IPIIPI00877123   IPI00647330   IPI00877159   IPI00952759   IPI00747148   
Protein Interaction databases
DIP (DOE-UCLA)Q86T90
IntAct (EBI)Q86T90
FunCoupENSG00000150477
BioGRIDKIAA1328
STRING (EMBL)KIAA1328
ZODIACKIAA1328
Ontologies - Pathways
QuickGOQ86T90
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkKIAA1328
Atlas of Cancer Signalling NetworkKIAA1328
Wikipedia pathwaysKIAA1328
Orthology - Evolution
OrthoDB57536
GeneTree (enSembl)ENSG00000150477
Phylogenetic Trees/Animal Genes : TreeFamKIAA1328
HOVERGENQ86T90
HOGENOMQ86T90
Homologs : HomoloGeneKIAA1328
Homology/Alignments : Family Browser (UCSC)KIAA1328
Gene fusions - Rearrangements
Tumor Fusion PortalKIAA1328
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1328 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1328
dbVarKIAA1328
ClinVarKIAA1328
1000_GenomesKIAA1328 
Exome Variant ServerKIAA1328
ExAC (Exome Aggregation Consortium)ENSG00000150477
GNOMAD BrowserENSG00000150477
Genetic variants : HAPMAP57536
Genomic Variants (DGV)KIAA1328 [DGVbeta]
DECIPHERKIAA1328 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1328 
Mutations
ICGC Data PortalKIAA1328 
TCGA Data PortalKIAA1328 
Broad Tumor PortalKIAA1328
OASIS PortalKIAA1328 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1328  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1328
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1328
DgiDB (Drug Gene Interaction Database)KIAA1328
DoCM (Curated mutations)KIAA1328 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1328 (select a term)
intoGenKIAA1328
Cancer3DKIAA1328(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616480   
Orphanet
DisGeNETKIAA1328
MedgenKIAA1328
Genetic Testing Registry KIAA1328
NextProtQ86T90 [Medical]
TSGene57536
GENETestsKIAA1328
Target ValidationKIAA1328
Huge Navigator KIAA1328 [HugePedia]
snp3D : Map Gene to Disease57536
BioCentury BCIQKIAA1328
ClinGenKIAA1328
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57536
Chemical/Pharm GKB GenePA134875219
Clinical trialKIAA1328
Miscellaneous
canSAR (ICR)KIAA1328 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1328
EVEXKIAA1328
GoPubMedKIAA1328
iHOPKIAA1328
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:37:31 CET 2017

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