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KIAA1407 (KIAA1407)

Identity

Other alias-
HGNC (Hugo) KIAA1407
LocusID (NCBI) 57577
Atlas_Id 64884
Location 3q13.31  [Link to chromosome band 3q13]
Location_base_pair Starts at 113682984 and ends at 113775460 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1407   29272
Cards
Entrez_Gene (NCBI)KIAA1407  57577  KIAA1407
Aliases
GeneCards (Weizmann)KIAA1407
Ensembl hg19 (Hinxton)ENSG00000163617 [Gene_View]  chr3:113682984-113775460 [Contig_View]  KIAA1407 [Vega]
Ensembl hg38 (Hinxton)ENSG00000163617 [Gene_View]  chr3:113682984-113775460 [Contig_View]  KIAA1407 [Vega]
ICGC DataPortalENSG00000163617
TCGA cBioPortalKIAA1407
AceView (NCBI)KIAA1407
Genatlas (Paris)KIAA1407
WikiGenes57577
SOURCE (Princeton)KIAA1407
Genetics Home Reference (NIH)KIAA1407
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA1407  -     chr3:113682984-113775460 -  3q13.31   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA1407  -     3q13.31   [Description]    (hg38-Dec_2013)
EnsemblKIAA1407 - 3q13.31 [CytoView hg19]  KIAA1407 - 3q13.31 [CytoView hg38]
Mapping of homologs : NCBIKIAA1407 [Mapview hg19]  KIAA1407 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB037828 AF509494 AK125304 AK295855 AK302488
RefSeq transcript (Entrez)NM_020817
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)KIAA1407
Cluster EST : UnigeneHs.477159 [ NCBI ]
CGAP (NCI)Hs.477159
Alternative Splicing GalleryENSG00000163617
Gene ExpressionKIAA1407 [ NCBI-GEO ]   KIAA1407 [ EBI - ARRAY_EXPRESS ]   KIAA1407 [ SEEK ]   KIAA1407 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1407 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57577
GTEX Portal (Tissue expression)KIAA1407
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NCU4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NCU4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NCU4
Splice isoforms : SwissVarQ8NCU4
PhosPhoSitePlusQ8NCU4
Domains : Interpro (EBI)KIAA1407   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KIAA1407
DMDM Disease mutations57577
Blocks (Seattle)KIAA1407
SuperfamilyQ8NCU4
Human Protein AtlasENSG00000163617
Peptide AtlasQ8NCU4
HPRD13856
IPIIPI00477003   IPI01012486   IPI00946822   IPI00947094   IPI00946630   IPI00946365   
Protein Interaction databases
DIP (DOE-UCLA)Q8NCU4
IntAct (EBI)Q8NCU4
FunCoupENSG00000163617
BioGRIDKIAA1407
STRING (EMBL)KIAA1407
ZODIACKIAA1407
Ontologies - Pathways
QuickGOQ8NCU4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA1407
Atlas of Cancer Signalling NetworkKIAA1407
Wikipedia pathwaysKIAA1407
Orthology - Evolution
OrthoDB57577
GeneTree (enSembl)ENSG00000163617
Phylogenetic Trees/Animal Genes : TreeFamKIAA1407
HOVERGENQ8NCU4
HOGENOMQ8NCU4
Homologs : HomoloGeneKIAA1407
Homology/Alignments : Family Browser (UCSC)KIAA1407
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1407 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1407
dbVarKIAA1407
ClinVarKIAA1407
1000_GenomesKIAA1407 
Exome Variant ServerKIAA1407
ExAC (Exome Aggregation Consortium)KIAA1407 (select the gene name)
Genetic variants : HAPMAP57577
Genomic Variants (DGV)KIAA1407 [DGVbeta]
DECIPHER (Syndromes)3:113682984-113775460  ENSG00000163617
CONAN: Copy Number AnalysisKIAA1407 
Mutations
ICGC Data PortalKIAA1407 
TCGA Data PortalKIAA1407 
Broad Tumor PortalKIAA1407
OASIS PortalKIAA1407 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1407  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1407
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1407
DgiDB (Drug Gene Interaction Database)KIAA1407
DoCM (Curated mutations)KIAA1407 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1407 (select a term)
intoGenKIAA1407
Cancer3DKIAA1407(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1407
Genetic Testing Registry KIAA1407
NextProtQ8NCU4 [Medical]
TSGene57577
GENETestsKIAA1407
Huge Navigator KIAA1407 [HugePedia]
snp3D : Map Gene to Disease57577
BioCentury BCIQKIAA1407
ClinGenKIAA1407
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57577
Chemical/Pharm GKB GenePA134916748
Clinical trialKIAA1407
Miscellaneous
canSAR (ICR)KIAA1407 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1407
EVEXKIAA1407
GoPubMedKIAA1407
iHOPKIAA1407
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:46 CET 2017

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