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KIAA1429 (KIAA1429)

Identity

Alias_symbol (synonym)DKFZP434I116
fSAP121
Other aliasMSTP054
HGNC (Hugo) KIAA1429
LocusID (NCBI) 25962
Atlas_Id 64885
Location 8q22.1  [Link to chromosome band 8q22]
Location_base_pair Starts at 94487777 and ends at 94553518 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIAA1429 (8q22.1) / CAMK2A (5q32)KIAA1429 (8q22.1) / CMIP (16q23.2)KIAA1429 (8q22.1) / CPA6 (8q13.2)
KIAA1429 (8q22.1) / PNLIPRP1 (10q25.3)KIAA1429 (8q22.1) / SLC12A8 (3q21.2)KIAA1429 (8q22.1) / THADA (2p21)
PTMS (12p13.31) / KIAA1429 (8q22.1)KIAA1429 CPA6KIAA1429 PNLIPRP1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1429   24500
Cards
Entrez_Gene (NCBI)KIAA1429  25962  KIAA1429
AliasesMSTP054; fSAP121
GeneCards (Weizmann)KIAA1429
Ensembl hg19 (Hinxton)ENSG00000164944 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164944 [Gene_View]  chr8:94487777-94553518 [Contig_View]  KIAA1429 [Vega]
ICGC DataPortalENSG00000164944
TCGA cBioPortalKIAA1429
AceView (NCBI)KIAA1429
Genatlas (Paris)KIAA1429
WikiGenes25962
SOURCE (Princeton)KIAA1429
Genetics Home Reference (NIH)KIAA1429
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1429  -     chr8:94487777-94553518 -  8q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1429  -     8q22.1   [Description]    (hg19-Feb_2009)
EnsemblKIAA1429 - 8q22.1 [CytoView hg19]  KIAA1429 - 8q22.1 [CytoView hg38]
Mapping of homologs : NCBIKIAA1429 [Mapview hg19]  KIAA1429 [Mapview hg38]
OMIM616447   
Gene and transcription
Genbank (Entrez)AA731668 AB037850 AF116724 AK000668 AK022906
RefSeq transcript (Entrez)NM_015496 NM_183009
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1429
Cluster EST : UnigeneHs.202238 [ NCBI ]
CGAP (NCI)Hs.202238
Alternative Splicing GalleryENSG00000164944
Gene ExpressionKIAA1429 [ NCBI-GEO ]   KIAA1429 [ EBI - ARRAY_EXPRESS ]   KIAA1429 [ SEEK ]   KIAA1429 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1429 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25962
GTEX Portal (Tissue expression)KIAA1429
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ69YN4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ69YN4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ69YN4
Splice isoforms : SwissVarQ69YN4
PhosPhoSitePlusQ69YN4
Domains : Interpro (EBI)ARM-type_fold    VIR_N    Virilizer   
Domain families : Pfam (Sanger)VIR_N (PF15912)   
Domain families : Pfam (NCBI)pfam15912   
Conserved Domain (NCBI)KIAA1429
DMDM Disease mutations25962
Blocks (Seattle)KIAA1429
SuperfamilyQ69YN4
Human Protein AtlasENSG00000164944
Peptide AtlasQ69YN4
HPRD10889
IPIIPI00036742   IPI00868931   IPI00789281   IPI00337420   IPI00983737   
Protein Interaction databases
DIP (DOE-UCLA)Q69YN4
IntAct (EBI)Q69YN4
FunCoupENSG00000164944
BioGRIDKIAA1429
STRING (EMBL)KIAA1429
ZODIACKIAA1429
Ontologies - Pathways
QuickGOQ69YN4
Ontology : AmiGORNA binding  nucleoplasm  cytosol  mRNA processing  RNA splicing  nuclear body  nuclear speck  MIS complex  mRNA methylation  
Ontology : EGO-EBIRNA binding  nucleoplasm  cytosol  mRNA processing  RNA splicing  nuclear body  nuclear speck  MIS complex  mRNA methylation  
NDEx NetworkKIAA1429
Atlas of Cancer Signalling NetworkKIAA1429
Wikipedia pathwaysKIAA1429
Orthology - Evolution
OrthoDB25962
GeneTree (enSembl)ENSG00000164944
Phylogenetic Trees/Animal Genes : TreeFamKIAA1429
HOVERGENQ69YN4
HOGENOMQ69YN4
Homologs : HomoloGeneKIAA1429
Homology/Alignments : Family Browser (UCSC)KIAA1429
Gene fusions - Rearrangements
Fusion: TCGAKIAA1429 CPA6
Fusion: TCGAKIAA1429 PNLIPRP1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1429 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1429
dbVarKIAA1429
ClinVarKIAA1429
1000_GenomesKIAA1429 
Exome Variant ServerKIAA1429
ExAC (Exome Aggregation Consortium)KIAA1429 (select the gene name)
Genetic variants : HAPMAP25962
Genomic Variants (DGV)KIAA1429 [DGVbeta]
DECIPHERKIAA1429 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1429 
Mutations
ICGC Data PortalKIAA1429 
TCGA Data PortalKIAA1429 
Broad Tumor PortalKIAA1429
OASIS PortalKIAA1429 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1429  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1429
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1429
DgiDB (Drug Gene Interaction Database)KIAA1429
DoCM (Curated mutations)KIAA1429 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1429 (select a term)
intoGenKIAA1429
Cancer3DKIAA1429(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616447   
Orphanet
MedgenKIAA1429
Genetic Testing Registry KIAA1429
NextProtQ69YN4 [Medical]
TSGene25962
GENETestsKIAA1429
Target ValidationKIAA1429
Huge Navigator KIAA1429 [HugePedia]
snp3D : Map Gene to Disease25962
BioCentury BCIQKIAA1429
ClinGenKIAA1429
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25962
Chemical/Pharm GKB GenePA142671611
Clinical trialKIAA1429
Miscellaneous
canSAR (ICR)KIAA1429 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1429
EVEXKIAA1429
GoPubMedKIAA1429
iHOPKIAA1429
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:11:51 CEST 2017

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