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KIAA1468 (KIAA1468)

Identity

Alias_symbol (synonym)HsT885
HsT3308
FLJ33841
Other alias
HGNC (Hugo) KIAA1468
LocusID (NCBI) 57614
Atlas_Id 53935
Location 18q21.33  [Link to chromosome band 18q21]
Location_base_pair Starts at 62187291 and ends at 62307122 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BRIP1 (17q23.2) / KIAA1468 (18q21.33)KIAA1468 (18q21.33) / KIAA1468 (18q21.33)KIAA1468 (18q21.33) / RET (10q11.21)
PTPRM (18p11.23) / KIAA1468 (18q21.33)TNFRSF11A (18q21.33) / KIAA1468 (18q21.33)ZCCHC2 (18q21.33) / KIAA1468 (18q21.33)
PTPRM 18p11.23 / KIAA1468 18q21.33TNFRSF11A 18q21.33 / KIAA1468 18q21.33

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1468   29289
Cards
Entrez_Gene (NCBI)KIAA1468  57614  KIAA1468
AliasesHsT3308; HsT885
GeneCards (Weizmann)KIAA1468
Ensembl hg19 (Hinxton)ENSG00000134444 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134444 [Gene_View]  chr18:62187291-62307122 [Contig_View]  KIAA1468 [Vega]
ICGC DataPortalENSG00000134444
TCGA cBioPortalKIAA1468
AceView (NCBI)KIAA1468
Genatlas (Paris)KIAA1468
WikiGenes57614
SOURCE (Princeton)KIAA1468
Genetics Home Reference (NIH)KIAA1468
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1468  -     chr18:62187291-62307122 +  18q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1468  -     18q21.33   [Description]    (hg19-Feb_2009)
EnsemblKIAA1468 - 18q21.33 [CytoView hg19]  KIAA1468 - 18q21.33 [CytoView hg38]
Mapping of homologs : NCBIKIAA1468 [Mapview hg19]  KIAA1468 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA632129 AB040901 AK025228 AK091160 AK315400
RefSeq transcript (Entrez)NM_001346229 NM_001346230 NM_001346231 NM_001346232 NM_001346233 NM_001346234 NM_001346235 NM_020854
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1468
Cluster EST : UnigeneHs.465323 [ NCBI ]
CGAP (NCI)Hs.465323
Alternative Splicing GalleryENSG00000134444
Gene ExpressionKIAA1468 [ NCBI-GEO ]   KIAA1468 [ EBI - ARRAY_EXPRESS ]   KIAA1468 [ SEEK ]   KIAA1468 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1468 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57614
GTEX Portal (Tissue expression)KIAA1468
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P260   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P260  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P260
Splice isoforms : SwissVarQ9P260
PhosPhoSitePlusQ9P260
Domaine pattern : Prosite (Expaxy)HEAT_REPEAT (PS50077)    LISH (PS50896)   
Domains : Interpro (EBI)ARM-like    ARM-type_fold    HEAT_type_2    LisH   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)LisH (SM00667)  
Conserved Domain (NCBI)KIAA1468
DMDM Disease mutations57614
Blocks (Seattle)KIAA1468
SuperfamilyQ9P260
Human Protein AtlasENSG00000134444
Peptide AtlasQ9P260
HPRD13866
IPIIPI00797368   IPI00023330   
Protein Interaction databases
DIP (DOE-UCLA)Q9P260
IntAct (EBI)Q9P260
FunCoupENSG00000134444
BioGRIDKIAA1468
STRING (EMBL)KIAA1468
ZODIACKIAA1468
Ontologies - Pathways
QuickGOQ9P260
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA1468
Atlas of Cancer Signalling NetworkKIAA1468
Wikipedia pathwaysKIAA1468
Orthology - Evolution
OrthoDB57614
GeneTree (enSembl)ENSG00000134444
Phylogenetic Trees/Animal Genes : TreeFamKIAA1468
HOVERGENQ9P260
HOGENOMQ9P260
Homologs : HomoloGeneKIAA1468
Homology/Alignments : Family Browser (UCSC)KIAA1468
Gene fusions - Rearrangements
Fusion : MitelmanPTPRM/KIAA1468 [18p11.23/18q21.33]  [t(18;18)(p11;q21)]  
Fusion : MitelmanTNFRSF11A/KIAA1468 [18q21.33/18q21.33]  [t(18;18)(q21;q21)]  
Fusion: TCGAPTPRM 18p11.23 KIAA1468 18q21.33 LUAD
Fusion: TCGATNFRSF11A 18q21.33 KIAA1468 18q21.33 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1468 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1468
dbVarKIAA1468
ClinVarKIAA1468
1000_GenomesKIAA1468 
Exome Variant ServerKIAA1468
ExAC (Exome Aggregation Consortium)KIAA1468 (select the gene name)
Genetic variants : HAPMAP57614
Genomic Variants (DGV)KIAA1468 [DGVbeta]
DECIPHERKIAA1468 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1468 
Mutations
ICGC Data PortalKIAA1468 
TCGA Data PortalKIAA1468 
Broad Tumor PortalKIAA1468
OASIS PortalKIAA1468 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1468  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1468
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1468
DgiDB (Drug Gene Interaction Database)KIAA1468
DoCM (Curated mutations)KIAA1468 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1468 (select a term)
intoGenKIAA1468
Cancer3DKIAA1468(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1468
Genetic Testing Registry KIAA1468
NextProtQ9P260 [Medical]
TSGene57614
GENETestsKIAA1468
Huge Navigator KIAA1468 [HugePedia]
snp3D : Map Gene to Disease57614
BioCentury BCIQKIAA1468
ClinGenKIAA1468
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57614
Chemical/Pharm GKB GenePA134865247
Clinical trialKIAA1468
Miscellaneous
canSAR (ICR)KIAA1468 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1468
EVEXKIAA1468
GoPubMedKIAA1468
iHOPKIAA1468
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:21:30 CEST 2017

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