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KIAA1549L (KIAA1549-like)

Identity

Alias_namesC11orf69
C11orf41
chromosome 11 open reading frame 69
chromosome 11 open reading frame 41
Alias_symbol (synonym)G2
MGC34830
Other alias
HGNC (Hugo) KIAA1549L
LocusID (NCBI) 25758
Atlas_Id 64888
Location 11p13  [Link to chromosome band 11p13]
Location_base_pair Starts at 33563877 and ends at 33695646 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DBNL (7p13) / KIAA1549L (11p13)KIAA1549L (11p13) / WARS2 (1p12)RUNX1 (21q22.12) / KIAA1549L (11p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(11;21)(p14;q22) RUNX1/KIAA1549L
t(11;21)(p14;q22) RUNX1/KIAA1549L


External links

Nomenclature
HGNC (Hugo)KIAA1549L   24836
Cards
Entrez_Gene (NCBI)KIAA1549L  25758  KIAA1549-like
AliasesC11orf41; C11orf69; G2
GeneCards (Weizmann)KIAA1549L
Ensembl hg19 (Hinxton)ENSG00000110427 [Gene_View]  chr11:33563877-33695646 [Contig_View]  KIAA1549L [Vega]
Ensembl hg38 (Hinxton)ENSG00000110427 [Gene_View]  chr11:33563877-33695646 [Contig_View]  KIAA1549L [Vega]
ICGC DataPortalENSG00000110427
TCGA cBioPortalKIAA1549L
AceView (NCBI)KIAA1549L
Genatlas (Paris)KIAA1549L
WikiGenes25758
SOURCE (Princeton)KIAA1549L
Genetics Home Reference (NIH)KIAA1549L
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA1549L  -     chr11:33563877-33695646 +  11p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA1549L  -     11p13   [Description]    (hg38-Dec_2013)
EnsemblKIAA1549L - 11p13 [CytoView hg19]  KIAA1549L - 11p13 [CytoView hg38]
Mapping of homologs : NCBIKIAA1549L [Mapview hg19]  KIAA1549L [Mapview hg38]
OMIM612297   
Gene and transcription
Genbank (Entrez)AK094307 AK124395 BC025668 DA034273 U10991
RefSeq transcript (Entrez)NM_012194
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_009237 NW_004929378
Consensus coding sequences : CCDS (NCBI)KIAA1549L
Cluster EST : UnigeneHs.502266 [ NCBI ]
CGAP (NCI)Hs.502266
Alternative Splicing GalleryENSG00000110427
Gene ExpressionKIAA1549L [ NCBI-GEO ]   KIAA1549L [ EBI - ARRAY_EXPRESS ]   KIAA1549L [ SEEK ]   KIAA1549L [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1549L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25758
GTEX Portal (Tissue expression)KIAA1549L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZVL6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZVL6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZVL6
Splice isoforms : SwissVarQ6ZVL6
PhosPhoSitePlusQ6ZVL6
Domains : Interpro (EBI)DUF3827   
Domain families : Pfam (Sanger)DUF3827 (PF12877)   
Domain families : Pfam (NCBI)pfam12877   
Conserved Domain (NCBI)KIAA1549L
DMDM Disease mutations25758
Blocks (Seattle)KIAA1549L
SuperfamilyQ6ZVL6
Human Protein AtlasENSG00000110427
Peptide AtlasQ6ZVL6
IPIIPI00896394   IPI00852979   IPI01010141   IPI00975474   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZVL6
IntAct (EBI)Q6ZVL6
FunCoupENSG00000110427
BioGRIDKIAA1549L
STRING (EMBL)KIAA1549L
ZODIACKIAA1549L
Ontologies - Pathways
QuickGOQ6ZVL6
Ontology : AmiGOpositive regulation of defense response to virus by host  integral component of membrane  activation of mitophagy in response to mitochondrial depolarization  
Ontology : EGO-EBIpositive regulation of defense response to virus by host  integral component of membrane  activation of mitophagy in response to mitochondrial depolarization  
NDEx NetworkKIAA1549L
Atlas of Cancer Signalling NetworkKIAA1549L
Wikipedia pathwaysKIAA1549L
Orthology - Evolution
OrthoDB25758
GeneTree (enSembl)ENSG00000110427
Phylogenetic Trees/Animal Genes : TreeFamKIAA1549L
HOVERGENQ6ZVL6
HOGENOMQ6ZVL6
Homologs : HomoloGeneKIAA1549L
Homology/Alignments : Family Browser (UCSC)KIAA1549L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1549L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1549L
dbVarKIAA1549L
ClinVarKIAA1549L
1000_GenomesKIAA1549L 
Exome Variant ServerKIAA1549L
ExAC (Exome Aggregation Consortium)KIAA1549L (select the gene name)
Genetic variants : HAPMAP25758
Genomic Variants (DGV)KIAA1549L [DGVbeta]
DECIPHER (Syndromes)11:33563877-33695646  ENSG00000110427
CONAN: Copy Number AnalysisKIAA1549L 
Mutations
ICGC Data PortalKIAA1549L 
TCGA Data PortalKIAA1549L 
Broad Tumor PortalKIAA1549L
OASIS PortalKIAA1549L [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIAA1549L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1549L
DgiDB (Drug Gene Interaction Database)KIAA1549L
DoCM (Curated mutations)KIAA1549L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1549L (select a term)
intoGenKIAA1549L
Cancer3DKIAA1549L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612297   
Orphanet
MedgenKIAA1549L
Genetic Testing Registry KIAA1549L
NextProtQ6ZVL6 [Medical]
TSGene25758
GENETestsKIAA1549L
Huge Navigator KIAA1549L [HugePedia]
snp3D : Map Gene to Disease25758
BioCentury BCIQKIAA1549L
ClinGenKIAA1549L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD25758
Chemical/Pharm GKB GenePA142672301
Clinical trialKIAA1549L
Miscellaneous
canSAR (ICR)KIAA1549L (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1549L
EVEXKIAA1549L
GoPubMedKIAA1549L
iHOPKIAA1549L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:47 CET 2017

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