Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIAA1551 (KIAA1551)

Identity

Alias_namesC12orf35
chromosome 12 open reading frame 35
Alias_symbol (synonym)FLJ20696
FLJ10652
UTA2-1
Other alias
HGNC (Hugo) KIAA1551
LocusID (NCBI) 55196
Atlas_Id 64889
Location 12p11.21  [Link to chromosome band 12p11]
Location_base_pair Starts at 31959419 and ends at 31993107 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
KIAA1551 (12p11.21) / SOX5 (12p12.1)TSPAN2 (1p13.2) / KIAA1551 (12p11.21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1551   25559
Cards
Entrez_Gene (NCBI)KIAA1551  55196  KIAA1551
AliasesC12orf35; UTA2-1
GeneCards (Weizmann)KIAA1551
Ensembl hg19 (Hinxton)ENSG00000174718 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174718 [Gene_View]  chr12:31959419-31993107 [Contig_View]  KIAA1551 [Vega]
ICGC DataPortalENSG00000174718
TCGA cBioPortalKIAA1551
AceView (NCBI)KIAA1551
Genatlas (Paris)KIAA1551
WikiGenes55196
SOURCE (Princeton)KIAA1551
Genetics Home Reference (NIH)KIAA1551
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1551  -     chr12:31959419-31993107 +  12p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1551  -     12p11.21   [Description]    (hg19-Feb_2009)
EnsemblKIAA1551 - 12p11.21 [CytoView hg19]  KIAA1551 - 12p11.21 [CytoView hg38]
Mapping of homologs : NCBIKIAA1551 [Mapview hg19]  KIAA1551 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB046771 AK000688 AK000703 AK001514 AK092399
RefSeq transcript (Entrez)NM_018169
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1551
Cluster EST : UnigeneHs.445129 [ NCBI ]
CGAP (NCI)Hs.445129
Alternative Splicing GalleryENSG00000174718
Gene ExpressionKIAA1551 [ NCBI-GEO ]   KIAA1551 [ EBI - ARRAY_EXPRESS ]   KIAA1551 [ SEEK ]   KIAA1551 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1551 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55196
GTEX Portal (Tissue expression)KIAA1551
Human Protein AtlasENSG00000174718-KIAA1551 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCM1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCM1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCM1
Splice isoforms : SwissVarQ9HCM1
PhosPhoSitePlusQ9HCM1
Domains : Interpro (EBI)DUF4617   
Domain families : Pfam (Sanger)DUF4617 (PF15395)   
Domain families : Pfam (NCBI)pfam15395   
Conserved Domain (NCBI)KIAA1551
DMDM Disease mutations55196
Blocks (Seattle)KIAA1551
SuperfamilyQ9HCM1
Human Protein Atlas [tissue]ENSG00000174718-KIAA1551 [tissue]
Peptide AtlasQ9HCM1
HPRD07691
IPIIPI00018808   IPI01012724   IPI01013187   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCM1
IntAct (EBI)Q9HCM1
FunCoupENSG00000174718
BioGRIDKIAA1551
STRING (EMBL)KIAA1551
ZODIACKIAA1551
Ontologies - Pathways
QuickGOQ9HCM1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA1551
Atlas of Cancer Signalling NetworkKIAA1551
Wikipedia pathwaysKIAA1551
Orthology - Evolution
OrthoDB55196
GeneTree (enSembl)ENSG00000174718
Phylogenetic Trees/Animal Genes : TreeFamKIAA1551
HOVERGENQ9HCM1
HOGENOMQ9HCM1
Homologs : HomoloGeneKIAA1551
Homology/Alignments : Family Browser (UCSC)KIAA1551
Gene fusions - Rearrangements
Fusion: Tumor Portal KIAA1551
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1551 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1551
dbVarKIAA1551
ClinVarKIAA1551
1000_GenomesKIAA1551 
Exome Variant ServerKIAA1551
ExAC (Exome Aggregation Consortium)ENSG00000174718
GNOMAD BrowserENSG00000174718
Genetic variants : HAPMAP55196
Genomic Variants (DGV)KIAA1551 [DGVbeta]
DECIPHERKIAA1551 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1551 
Mutations
ICGC Data PortalKIAA1551 
TCGA Data PortalKIAA1551 
Broad Tumor PortalKIAA1551
OASIS PortalKIAA1551 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDKIAA1551
BioMutasearch KIAA1551
DgiDB (Drug Gene Interaction Database)KIAA1551
DoCM (Curated mutations)KIAA1551 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1551 (select a term)
intoGenKIAA1551
Cancer3DKIAA1551(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1551
Genetic Testing Registry KIAA1551
NextProtQ9HCM1 [Medical]
TSGene55196
GENETestsKIAA1551
Target ValidationKIAA1551
Huge Navigator KIAA1551 [HugePedia]
snp3D : Map Gene to Disease55196
BioCentury BCIQKIAA1551
ClinGenKIAA1551
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55196
Chemical/Pharm GKB GenePA143485365
Clinical trialKIAA1551
Miscellaneous
canSAR (ICR)KIAA1551 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1551
EVEXKIAA1551
GoPubMedKIAA1551
iHOPKIAA1551
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:52:27 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.