Atlas of Genetics and Cytogenetics in Oncology and Haematology


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KIAA1644 (KIAA1644)

Identity

Other alias-
HGNC (Hugo) KIAA1644
LocusID (NCBI) 85352
Atlas_Id 64893
Location 22q13.31  [Link to chromosome band 22q13]
Location_base_pair Starts at 44243677 and ends at 44312851 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1644   29335
Cards
Entrez_Gene (NCBI)KIAA1644  85352  KIAA1644
Aliases
GeneCards (Weizmann)KIAA1644
Ensembl hg19 (Hinxton)ENSG00000138944 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000138944 [Gene_View]  chr22:44243677-44312851 [Contig_View]  KIAA1644 [Vega]
ICGC DataPortalENSG00000138944
TCGA cBioPortalKIAA1644
AceView (NCBI)KIAA1644
Genatlas (Paris)KIAA1644
WikiGenes85352
SOURCE (Princeton)KIAA1644
Genetics Home Reference (NIH)KIAA1644
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1644  -     chr22:44243677-44312851 -  22q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1644  -     22q13.31   [Description]    (hg19-Feb_2009)
EnsemblKIAA1644 - 22q13.31 [CytoView hg19]  KIAA1644 - 22q13.31 [CytoView hg38]
Mapping of homologs : NCBIKIAA1644 [Mapview hg19]  KIAA1644 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB051431 AK090953 BC068280 BC104183 BC104184
RefSeq transcript (Entrez)NM_001099294
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1644
Cluster EST : UnigeneHs.6829 [ NCBI ]
CGAP (NCI)Hs.6829
Alternative Splicing GalleryENSG00000138944
Gene ExpressionKIAA1644 [ NCBI-GEO ]   KIAA1644 [ EBI - ARRAY_EXPRESS ]   KIAA1644 [ SEEK ]   KIAA1644 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1644 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85352
GTEX Portal (Tissue expression)KIAA1644
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3SXP7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3SXP7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3SXP7
Splice isoforms : SwissVarQ3SXP7
PhosPhoSitePlusQ3SXP7
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)KIAA1644
DMDM Disease mutations85352
Blocks (Seattle)KIAA1644
SuperfamilyQ3SXP7
Human Protein AtlasENSG00000138944
Peptide AtlasQ3SXP7
IPIIPI00400895   IPI00742749   
Protein Interaction databases
DIP (DOE-UCLA)Q3SXP7
IntAct (EBI)Q3SXP7
FunCoupENSG00000138944
BioGRIDKIAA1644
STRING (EMBL)KIAA1644
ZODIACKIAA1644
Ontologies - Pathways
QuickGOQ3SXP7
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkKIAA1644
Atlas of Cancer Signalling NetworkKIAA1644
Wikipedia pathwaysKIAA1644
Orthology - Evolution
OrthoDB85352
GeneTree (enSembl)ENSG00000138944
Phylogenetic Trees/Animal Genes : TreeFamKIAA1644
HOVERGENQ3SXP7
HOGENOMQ3SXP7
Homologs : HomoloGeneKIAA1644
Homology/Alignments : Family Browser (UCSC)KIAA1644
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1644 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1644
dbVarKIAA1644
ClinVarKIAA1644
1000_GenomesKIAA1644 
Exome Variant ServerKIAA1644
ExAC (Exome Aggregation Consortium)KIAA1644 (select the gene name)
Genetic variants : HAPMAP85352
Genomic Variants (DGV)KIAA1644 [DGVbeta]
DECIPHERKIAA1644 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1644 
Mutations
ICGC Data PortalKIAA1644 
TCGA Data PortalKIAA1644 
Broad Tumor PortalKIAA1644
OASIS PortalKIAA1644 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1644  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1644
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1644
DgiDB (Drug Gene Interaction Database)KIAA1644
DoCM (Curated mutations)KIAA1644 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1644 (select a term)
intoGenKIAA1644
Cancer3DKIAA1644(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1644
Genetic Testing Registry KIAA1644
NextProtQ3SXP7 [Medical]
TSGene85352
GENETestsKIAA1644
Target ValidationKIAA1644
Huge Navigator KIAA1644 [HugePedia]
snp3D : Map Gene to Disease85352
BioCentury BCIQKIAA1644
ClinGenKIAA1644
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85352
Chemical/Pharm GKB GenePA164721896
Clinical trialKIAA1644
Miscellaneous
canSAR (ICR)KIAA1644 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1644
EVEXKIAA1644
GoPubMedKIAA1644
iHOPKIAA1644
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:54:32 CEST 2017

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