Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIAA1683 (KIAA1683)

Identity

Other alias-
HGNC (Hugo) KIAA1683
LocusID (NCBI) 80726
Atlas_Id 64898
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 18257096 and ends at 18274509 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1683   29350
Cards
Entrez_Gene (NCBI)KIAA1683  80726  KIAA1683
Aliases
GeneCards (Weizmann)KIAA1683
Ensembl hg19 (Hinxton)ENSG00000130518 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130518 [Gene_View]  chr19:18257096-18274509 [Contig_View]  KIAA1683 [Vega]
ICGC DataPortalENSG00000130518
TCGA cBioPortalKIAA1683
AceView (NCBI)KIAA1683
Genatlas (Paris)KIAA1683
WikiGenes80726
SOURCE (Princeton)KIAA1683
Genetics Home Reference (NIH)KIAA1683
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1683  -     chr19:18257096-18274509 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1683  -     19p13.11   [Description]    (hg19-Feb_2009)
EnsemblKIAA1683 - 19p13.11 [CytoView hg19]  KIAA1683 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBIKIAA1683 [Mapview hg19]  KIAA1683 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB051470 AK057466 AK093064 AK095765 AK095771
RefSeq transcript (Entrez)NM_001145304 NM_001145305 NM_025249
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1683
Cluster EST : UnigeneHs.732366 [ NCBI ]
CGAP (NCI)Hs.732366
Alternative Splicing GalleryENSG00000130518
Gene ExpressionKIAA1683 [ NCBI-GEO ]   KIAA1683 [ EBI - ARRAY_EXPRESS ]   KIAA1683 [ SEEK ]   KIAA1683 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1683 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80726
GTEX Portal (Tissue expression)KIAA1683
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H0B3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H0B3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H0B3
Splice isoforms : SwissVarQ9H0B3
PhosPhoSitePlusQ9H0B3
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS    P-loop_NTPase   
Domain families : Pfam (Sanger)IQ (PF00612)   
Domain families : Pfam (NCBI)pfam00612   
Domain families : Smart (EMBL)IQ (SM00015)  
Conserved Domain (NCBI)KIAA1683
DMDM Disease mutations80726
Blocks (Seattle)KIAA1683
SuperfamilyQ9H0B3
Human Protein AtlasENSG00000130518
Peptide AtlasQ9H0B3
HPRD13882
IPIIPI00031282   IPI01010920   IPI00384249   IPI00815797   IPI00874228   IPI00923466   
Protein Interaction databases
DIP (DOE-UCLA)Q9H0B3
IntAct (EBI)Q9H0B3
FunCoupENSG00000130518
BioGRIDKIAA1683
STRING (EMBL)KIAA1683
ZODIACKIAA1683
Ontologies - Pathways
QuickGOQ9H0B3
Ontology : AmiGOprotein binding  nucleus  mitochondrion  
Ontology : EGO-EBIprotein binding  nucleus  mitochondrion  
NDEx NetworkKIAA1683
Atlas of Cancer Signalling NetworkKIAA1683
Wikipedia pathwaysKIAA1683
Orthology - Evolution
OrthoDB80726
GeneTree (enSembl)ENSG00000130518
Phylogenetic Trees/Animal Genes : TreeFamKIAA1683
HOVERGENQ9H0B3
HOGENOMQ9H0B3
Homologs : HomoloGeneKIAA1683
Homology/Alignments : Family Browser (UCSC)KIAA1683
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1683 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1683
dbVarKIAA1683
ClinVarKIAA1683
1000_GenomesKIAA1683 
Exome Variant ServerKIAA1683
ExAC (Exome Aggregation Consortium)KIAA1683 (select the gene name)
Genetic variants : HAPMAP80726
Genomic Variants (DGV)KIAA1683 [DGVbeta]
DECIPHERKIAA1683 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1683 
Mutations
ICGC Data PortalKIAA1683 
TCGA Data PortalKIAA1683 
Broad Tumor PortalKIAA1683
OASIS PortalKIAA1683 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1683  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1683
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1683
DgiDB (Drug Gene Interaction Database)KIAA1683
DoCM (Curated mutations)KIAA1683 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1683 (select a term)
intoGenKIAA1683
Cancer3DKIAA1683(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1683
Genetic Testing Registry KIAA1683
NextProtQ9H0B3 [Medical]
TSGene80726
GENETestsKIAA1683
Target ValidationKIAA1683
Huge Navigator KIAA1683 [HugePedia]
snp3D : Map Gene to Disease80726
BioCentury BCIQKIAA1683
ClinGenKIAA1683
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80726
Chemical/Pharm GKB GenePA134952902
Clinical trialKIAA1683
Miscellaneous
canSAR (ICR)KIAA1683 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1683
EVEXKIAA1683
GoPubMedKIAA1683
iHOPKIAA1683
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:54:33 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.