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KIAA1841 (KIAA1841)

Identity

Other alias-
HGNC (Hugo) KIAA1841
LocusID (NCBI) 84542
Atlas_Id 64903
Location 2p15  [Link to chromosome band 2p15]
Location_base_pair Starts at 61065870 and ends at 61124291 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KIAA1841 (2p16.1) / DDX58 (9p21.1)KIAA1841 (2p16.1) / KIAA1841 (2p16.1)PDE2A (11q13.4) / KIAA1841 (2p16.1)
SAMD4B (19q13.2) / KIAA1841 (2p16.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1841   29387
Cards
Entrez_Gene (NCBI)KIAA1841  84542  KIAA1841
Aliases
GeneCards (Weizmann)KIAA1841
Ensembl hg19 (Hinxton)ENSG00000162929 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162929 [Gene_View]  chr2:61065870-61124291 [Contig_View]  KIAA1841 [Vega]
ICGC DataPortalENSG00000162929
TCGA cBioPortalKIAA1841
AceView (NCBI)KIAA1841
Genatlas (Paris)KIAA1841
WikiGenes84542
SOURCE (Princeton)KIAA1841
Genetics Home Reference (NIH)KIAA1841
Genomic and cartography
GoldenPath hg38 (UCSC)KIAA1841  -     chr2:61065870-61124291 +  2p15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)KIAA1841  -     2p15   [Description]    (hg19-Feb_2009)
EnsemblKIAA1841 - 2p15 [CytoView hg19]  KIAA1841 - 2p15 [CytoView hg38]
Mapping of homologs : NCBIKIAA1841 [Mapview hg19]  KIAA1841 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB058744 AI560205 AK131267 AK309749 AL833595
RefSeq transcript (Entrez)NM_001129993 NM_001330432 NM_001330433 NM_001330434 NM_001330435 NM_001330436 NM_032506
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)KIAA1841
Cluster EST : UnigeneHs.606010 [ NCBI ]
CGAP (NCI)Hs.606010
Alternative Splicing GalleryENSG00000162929
Gene ExpressionKIAA1841 [ NCBI-GEO ]   KIAA1841 [ EBI - ARRAY_EXPRESS ]   KIAA1841 [ SEEK ]   KIAA1841 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1841 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84542
GTEX Portal (Tissue expression)KIAA1841
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6NSI8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6NSI8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6NSI8
Splice isoforms : SwissVarQ6NSI8
PhosPhoSitePlusQ6NSI8
Domains : Interpro (EBI)DUF3342   
Domain families : Pfam (Sanger)DUF3342 (PF11822)   
Domain families : Pfam (NCBI)pfam11822   
Conserved Domain (NCBI)KIAA1841
DMDM Disease mutations84542
Blocks (Seattle)KIAA1841
SuperfamilyQ6NSI8
Human Protein AtlasENSG00000162929
Peptide AtlasQ6NSI8
HPRD13896
IPIIPI00888896   IPI00479240   IPI00176778   IPI00887198   IPI01025066   IPI00894432   
Protein Interaction databases
DIP (DOE-UCLA)Q6NSI8
IntAct (EBI)Q6NSI8
FunCoupENSG00000162929
BioGRIDKIAA1841
STRING (EMBL)KIAA1841
ZODIACKIAA1841
Ontologies - Pathways
QuickGOQ6NSI8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA1841
Atlas of Cancer Signalling NetworkKIAA1841
Wikipedia pathwaysKIAA1841
Orthology - Evolution
OrthoDB84542
GeneTree (enSembl)ENSG00000162929
Phylogenetic Trees/Animal Genes : TreeFamKIAA1841
HOVERGENQ6NSI8
HOGENOMQ6NSI8
Homologs : HomoloGeneKIAA1841
Homology/Alignments : Family Browser (UCSC)KIAA1841
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1841 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1841
dbVarKIAA1841
ClinVarKIAA1841
1000_GenomesKIAA1841 
Exome Variant ServerKIAA1841
ExAC (Exome Aggregation Consortium)KIAA1841 (select the gene name)
Genetic variants : HAPMAP84542
Genomic Variants (DGV)KIAA1841 [DGVbeta]
DECIPHERKIAA1841 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisKIAA1841 
Mutations
ICGC Data PortalKIAA1841 
TCGA Data PortalKIAA1841 
Broad Tumor PortalKIAA1841
OASIS PortalKIAA1841 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1841  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1841
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1841
DgiDB (Drug Gene Interaction Database)KIAA1841
DoCM (Curated mutations)KIAA1841 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1841 (select a term)
intoGenKIAA1841
Cancer3DKIAA1841(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1841
Genetic Testing Registry KIAA1841
NextProtQ6NSI8 [Medical]
TSGene84542
GENETestsKIAA1841
Huge Navigator KIAA1841 [HugePedia]
snp3D : Map Gene to Disease84542
BioCentury BCIQKIAA1841
ClinGenKIAA1841
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84542
Chemical/Pharm GKB GenePA144596415
Clinical trialKIAA1841
Miscellaneous
canSAR (ICR)KIAA1841 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1841
EVEXKIAA1841
GoPubMedKIAA1841
iHOPKIAA1841
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:18:04 CEST 2017

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