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KIAA1875 (KIAA1875)

Identity

Other alias-
HGNC (Hugo) KIAA1875
LocusID (NCBI) 340390
Atlas_Id 64904
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 145162629 and ends at 145173218 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1875   26959
Cards
Entrez_Gene (NCBI)KIAA1875  340390  KIAA1875
Aliases
GeneCards (Weizmann)KIAA1875
Ensembl hg19 (Hinxton)ENSG00000179698 [Gene_View]  chr8:145162629-145173218 [Contig_View]  KIAA1875 [Vega]
Ensembl hg38 (Hinxton)ENSG00000179698 [Gene_View]  chr8:145162629-145173218 [Contig_View]  KIAA1875 [Vega]
ICGC DataPortalENSG00000179698
TCGA cBioPortalKIAA1875
AceView (NCBI)KIAA1875
Genatlas (Paris)KIAA1875
WikiGenes340390
SOURCE (Princeton)KIAA1875
Genetics Home Reference (NIH)KIAA1875
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA1875  -     chr8:145162629-145173218 +  8q24.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA1875  -     8q24.3   [Description]    (hg38-Dec_2013)
EnsemblKIAA1875 - 8q24.3 [CytoView hg19]  KIAA1875 - 8q24.3 [CytoView hg38]
Mapping of homologs : NCBIKIAA1875 [Mapview hg19]  KIAA1875 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB058778 AI567202 AK095597 AK124611 AK302485
RefSeq transcript (Entrez)NM_032529
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)KIAA1875
Cluster EST : UnigeneHs.98723 [ NCBI ]
CGAP (NCI)Hs.98723
Alternative Splicing GalleryENSG00000179698
Gene ExpressionKIAA1875 [ NCBI-GEO ]   KIAA1875 [ EBI - ARRAY_EXPRESS ]   KIAA1875 [ SEEK ]   KIAA1875 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1875 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340390
GTEX Portal (Tissue expression)KIAA1875
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NE52   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NE52  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NE52
Splice isoforms : SwissVarA6NE52
PhosPhoSitePlusA6NE52
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)KIAA1875
DMDM Disease mutations340390
Blocks (Seattle)KIAA1875
SuperfamilyA6NE52
Human Protein AtlasENSG00000179698
Peptide AtlasA6NE52
HPRD11168
IPIIPI00640715   IPI00377122   IPI00909490   IPI00446202   
Protein Interaction databases
DIP (DOE-UCLA)A6NE52
IntAct (EBI)A6NE52
FunCoupENSG00000179698
BioGRIDKIAA1875
STRING (EMBL)KIAA1875
ZODIACKIAA1875
Ontologies - Pathways
QuickGOA6NE52
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkKIAA1875
Atlas of Cancer Signalling NetworkKIAA1875
Wikipedia pathwaysKIAA1875
Orthology - Evolution
OrthoDB340390
GeneTree (enSembl)ENSG00000179698
Phylogenetic Trees/Animal Genes : TreeFamKIAA1875
HOVERGENA6NE52
HOGENOMA6NE52
Homologs : HomoloGeneKIAA1875
Homology/Alignments : Family Browser (UCSC)KIAA1875
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1875 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1875
dbVarKIAA1875
ClinVarKIAA1875
1000_GenomesKIAA1875 
Exome Variant ServerKIAA1875
ExAC (Exome Aggregation Consortium)KIAA1875 (select the gene name)
Genetic variants : HAPMAP340390
Genomic Variants (DGV)KIAA1875 [DGVbeta]
DECIPHER (Syndromes)8:145162629-145173218  ENSG00000179698
CONAN: Copy Number AnalysisKIAA1875 
Mutations
ICGC Data PortalKIAA1875 
TCGA Data PortalKIAA1875 
Broad Tumor PortalKIAA1875
OASIS PortalKIAA1875 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1875  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1875
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1875
DgiDB (Drug Gene Interaction Database)KIAA1875
DoCM (Curated mutations)KIAA1875 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1875 (select a term)
intoGenKIAA1875
Cancer3DKIAA1875(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1875
Genetic Testing Registry KIAA1875
NextProtA6NE52 [Medical]
TSGene340390
GENETestsKIAA1875
Huge Navigator KIAA1875 [HugePedia]
snp3D : Map Gene to Disease340390
BioCentury BCIQKIAA1875
ClinGenKIAA1875
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340390
Chemical/Pharm GKB GenePA142671601
Clinical trialKIAA1875
Miscellaneous
canSAR (ICR)KIAA1875 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1875
EVEXKIAA1875
GoPubMedKIAA1875
iHOPKIAA1875
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:09:50 CET 2017

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