Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

KIAA1919 (KIAA1919)

Identity

Other aliasMFSD4B
NaGLT1
HGNC (Hugo) KIAA1919
LocusID (NCBI) 91749
Atlas_Id 64905
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 111580482 and ends at 111590261 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)KIAA1919   21053
Cards
Entrez_Gene (NCBI)KIAA1919  91749  KIAA1919
AliasesMFSD4B; NaGLT1
GeneCards (Weizmann)KIAA1919
Ensembl hg19 (Hinxton) [Gene_View]  chr6:111580482-111590261 [Contig_View]  KIAA1919 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr6:111580482-111590261 [Contig_View]  KIAA1919 [Vega]
TCGA cBioPortalKIAA1919
AceView (NCBI)KIAA1919
Genatlas (Paris)KIAA1919
WikiGenes91749
SOURCE (Princeton)KIAA1919
Genetics Home Reference (NIH)KIAA1919
Genomic and cartography
GoldenPath hg19 (UCSC)KIAA1919  -     chr6:111580482-111590261 +  6q21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)KIAA1919  -     6q21   [Description]    (hg38-Dec_2013)
EnsemblKIAA1919 - 6q21 [CytoView hg19]  KIAA1919 - 6q21 [CytoView hg38]
Mapping of homologs : NCBIKIAA1919 [Mapview hg19]  KIAA1919 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB067506 AF161363 AI096577 AI151460 AK093136
RefSeq transcript (Entrez)NM_153369
RefSeq genomic (Entrez)NC_000006 NC_018917 NT_025741 NW_004929328
Consensus coding sequences : CCDS (NCBI)KIAA1919
Cluster EST : UnigeneHs.400572 [ NCBI ]
CGAP (NCI)Hs.400572
Gene ExpressionKIAA1919 [ NCBI-GEO ]   KIAA1919 [ EBI - ARRAY_EXPRESS ]   KIAA1919 [ SEEK ]   KIAA1919 [ MEM ]
Gene Expression Viewer (FireBrowse)KIAA1919 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91749
GTEX Portal (Tissue expression)KIAA1919
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5TF39   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5TF39  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5TF39
Splice isoforms : SwissVarQ5TF39
PhosPhoSitePlusQ5TF39
Domains : Interpro (EBI)MFS    MFS_dom   
Domain families : Pfam (Sanger)MFS_1 (PF07690)   
Domain families : Pfam (NCBI)pfam07690   
Conserved Domain (NCBI)KIAA1919
DMDM Disease mutations91749
Blocks (Seattle)KIAA1919
SuperfamilyQ5TF39
Peptide AtlasQ5TF39
HPRD13904
IPIIPI00217751   
Protein Interaction databases
DIP (DOE-UCLA)Q5TF39
IntAct (EBI)Q5TF39
BioGRIDKIAA1919
STRING (EMBL)KIAA1919
ZODIACKIAA1919
Ontologies - Pathways
QuickGOQ5TF39
Ontology : AmiGOsodium ion transport  carbohydrate transport  symporter activity  integral component of membrane  apical plasma membrane  transmembrane transport  
Ontology : EGO-EBIsodium ion transport  carbohydrate transport  symporter activity  integral component of membrane  apical plasma membrane  transmembrane transport  
NDEx NetworkKIAA1919
Atlas of Cancer Signalling NetworkKIAA1919
Wikipedia pathwaysKIAA1919
Orthology - Evolution
OrthoDB91749
Phylogenetic Trees/Animal Genes : TreeFamKIAA1919
HOVERGENQ5TF39
HOGENOMQ5TF39
Homologs : HomoloGeneKIAA1919
Homology/Alignments : Family Browser (UCSC)KIAA1919
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerKIAA1919 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)KIAA1919
dbVarKIAA1919
ClinVarKIAA1919
1000_GenomesKIAA1919 
Exome Variant ServerKIAA1919
ExAC (Exome Aggregation Consortium)KIAA1919 (select the gene name)
Genetic variants : HAPMAP91749
Genomic Variants (DGV)KIAA1919 [DGVbeta]
DECIPHER (Syndromes)6:111580482-111590261  
CONAN: Copy Number AnalysisKIAA1919 
Mutations
ICGC Data PortalKIAA1919 
TCGA Data PortalKIAA1919 
Broad Tumor PortalKIAA1919
OASIS PortalKIAA1919 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICKIAA1919  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDKIAA1919
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch KIAA1919
DgiDB (Drug Gene Interaction Database)KIAA1919
DoCM (Curated mutations)KIAA1919 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)KIAA1919 (select a term)
intoGenKIAA1919
Cancer3DKIAA1919(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenKIAA1919
Genetic Testing Registry KIAA1919
NextProtQ5TF39 [Medical]
TSGene91749
GENETestsKIAA1919
Huge Navigator KIAA1919 [HugePedia]
snp3D : Map Gene to Disease91749
BioCentury BCIQKIAA1919
ClinGenKIAA1919
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91749
Chemical/Pharm GKB GenePA128394744
Clinical trialKIAA1919
Miscellaneous
canSAR (ICR)KIAA1919 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineKIAA1919
EVEXKIAA1919
GoPubMedKIAA1919
iHOPKIAA1919
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:09:50 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.